Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003347 | Potato | nucleus | 95.89 | 88.05 |
| Solyc02g067340.2.1 | Tomato | nucleus | 59.59 | 51.94 |
| Solyc10g081490.1.1 | Tomato | nucleus | 44.18 | 47.78 |
| Solyc03g116100.2.1 | Tomato | nucleus | 52.4 | 45.95 |
| Solyc06g069850.2.1 | Tomato | nucleus | 54.11 | 41.91 |
| Solyc09g010840.1.1 | Tomato | nucleus | 21.58 | 17.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4BBV2 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF715 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g087960.2 | EnsemblPlants:Solyc02g087960.2.1 | UniParc:UPI00027682F1 |
Description
No Description!
Coordinates
chr2:+:50197581..50199145
Molecular Weight (calculated)
33061.5 Da
IEP (calculated)
6.665
GRAVY (calculated)
-0.815
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPPCCDKT GVKKGPWTPE EDIMLVSFVQ EHGPGNWRTV PTHTGLRRCS KSCRLRWTNY LRPGIKRGSF SDQEEKMIIQ LQALLGNKWA AIASYLPERT
101: DNDIKNYWNT HLKKKLRKLE TSDLYSNDGH CLSKFNSTSR GQWERTLQAD INTAKQALQN ALSLDESSPI PDIGCYPFIK QEAKMSTTTY ASSAENIAKL
201: LKQWTRSEST NNSEQSKASS STQFSCNTTN NNAMTEYSSS FEPSNSDQFS QATTPEAAGK FHGESKREMD DEIQLSVMLE SWLFDENDDL LI
101: DNDIKNYWNT HLKKKLRKLE TSDLYSNDGH CLSKFNSTSR GQWERTLQAD INTAKQALQN ALSLDESSPI PDIGCYPFIK QEAKMSTTTY ASSAENIAKL
201: LKQWTRSEST NNSEQSKASS STQFSCNTTN NNAMTEYSSS FEPSNSDQFS QATTPEAAGK FHGESKREMD DEIQLSVMLE SWLFDENDDL LI
001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF
Arabidopsis Description
MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.