Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g063630.1.1 | Tomato | mitochondrion | 50.0 | 13.6 |
| Solyc04g049870.1.1 | Tomato | cytosol | 16.22 | 5.88 |
| Solyc02g050290.1.1 | Tomato | cytosol | 5.41 | 3.67 |
| Solyc12g035900.1.1 | Tomato | cytosol | 2.7 | 1.16 |
| Solyc10g048130.1.1 | Tomato | mitochondrion, plastid | 1.35 | 1.02 |
| ATMG00830.1 | Thale cress | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
| Solyc06g065880.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc08g029270.1.1 | Tomato | cytosol, extracellular, mitochondrion, plasma membrane | 0.0 | 0.0 |
| Solyc11g063620.1.1 | Tomato | plasma membrane | 0.0 | 0.0 |
| Solyc12g035910.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc03g013380.1.1 | EnsemblPlantsGene:Solyc03g013380.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | TMHMM:TMhelix |
| UniParc:UPI000276852F | UniProt:K4BEQ9 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3:-:44954546..44954770
Molecular Weight (calculated)
8699.2 Da
IEP (calculated)
11.254
GRAVY (calculated)
0.334
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MGATSKNLLV IKLQPKIYDH IMLTVCISFF LLMTGISMTF FSLMKQQTSV RKIYKKEMVV ARKNLIHLRH WARV
001: MERKRPLLRL FVGPPARTQW SGWLVVSGSR RNASFMPRVL ATARIHSVIL PLLHSWTSFL NIVTFPCCVS GTFSIRSGLL APVHSFATDD TRGIFLWWFF
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN
Arabidopsis Description
Cytochrome C assembly protein [Source:UniProtKB/TrEMBL;Acc:F4IL90]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.