Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- endoplasmic reticulum 4
- extracellular 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45509 | Canola | endoplasmic reticulum, vacuole | 97.38 | 97.64 |
| HORVU3Hr1G115140.1 | Barley | plasma membrane, plastid, vacuole | 21.47 | 97.62 |
| CDY17583 | Canola | mitochondrion | 50.79 | 97.49 |
| HORVU3Hr1G115160.1 | Barley | endoplasmic reticulum | 15.97 | 81.33 |
| TraesCS4B01G146000.1 | Wheat | cytosol, plasma membrane, vacuole | 77.49 | 74.0 |
| VIT_00s0332g00130.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 60.73 | 53.21 |
| PGSC0003DMT400043522 | Potato | peroxisome | 55.76 | 48.41 |
| VIT_00s0246g00060.t01 | Wine grape | mitochondrion | 44.5 | 43.37 |
| GSMUA_Achr5P20920_001 | Banana | cytosol, plasma membrane, vacuole | 17.8 | 41.98 |
| HORVU6Hr1G037030.1 | Barley | cytosol | 0.26 | 1.69 |
| AT2G07768.1 | Thale cress | mitochondrion | 0.52 | 1.3 |
| ATMG00960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| Solyc03g013380.1.1 | Tomato | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:2.4.4.2.3.2 | EntrezGene:3890472 | ProteinID:AEK01263.1 | ProteinID:AEK01303.1 | ProteinID:AEK01320.1 | ArrayExpress:ATMG00830 |
| EnsemblPlantsGene:ATMG00830 | RefSeq:ATMG00830 | TAIR:ATMG00830 | RefSeq:ATMG00830-TAIR-G | EnsemblPlants:ATMG00830.1 | TAIR:ATMG00830.1 |
| Symbol:CCB382 | InterPro:Cyt_c_assembly | InterPro:Cyt_c_biogenesis | InterPro:Cyt_c_biogenesis_plant | ProteinID:DAB41521.1 | UniProt:G1C2S2 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015232 | GO:GO:0015886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0017004 | GO:GO:0020037 | RefSeq:NP_085539.2 | PFAM:PF01578 | PRINTS:PR01410 | PRINTS:PR01412 |
| PANTHER:PTHR30009 | PANTHER:PTHR30009:SF23 | UniParc:UPI000009297A | SEG:seg | : | : |
Description
CCB382CcmFN1 [Source:UniProtKB/TrEMBL;Acc:G1C2S2]
Coordinates
chrMt:-:231894..233042
Molecular Weight (calculated)
43338.2 Da
IEP (calculated)
10.133
GRAVY (calculated)
-0.147
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MSISIYEFFH YSLFPGLFVA FTYNKKQPPA FGAAPAFWCI LLSFLGLSFC HIPNNLSNYN VLTANAPFFY QISGTWSNHE GSILLWCRIP NFYGFFLCYR
101: GRPQSHNVLK QGGHRESLFF FFVSNFVKNS ILSLPRYEQE SGLKNQLYTP FVLRTLVDSE LRSRRNRTFD GPALFYAPLY PERKIKNPLD AWRSRGSREG
201: KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSPFLS ASSDPFVRNF FVCTEPLAES NPVPQDPISA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA
301: LHSPPMRKDA AEKNGTLLRS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY
101: GRPQSHNVLK QGGHRESLFF FFVSNFVKNS ILSLPRYEQE SGLKNQLYTP FVLRTLVDSE LRSRRNRTFD GPALFYAPLY PERKIKNPLD AWRSRGSREG
201: KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSPFLS ASSDPFVRNF FVCTEPLAES NPVPQDPISA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA
301: LHSPPMRKDA AEKNGTLLRS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.