Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 1
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G07768.1 | Thale cress | mitochondrion | 62.56 | 82.47 |
| HORVU5Hr1G058280.1 | Barley | extracellular, golgi, mitochondrion | 34.98 | 81.61 |
| HORVU3Hr1G055030.1 | Barley | mitochondrion, peroxisome, plastid, vacuole | 34.48 | 80.46 |
| HORVU2Hr1G070240.1 | Barley | golgi, mitochondrion, vacuole | 16.75 | 77.27 |
| TraesCS1B01G451000.1 | Wheat | mitochondrion | 89.16 | 61.36 |
| TraesCS7D01G533300.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 88.18 | 60.68 |
| TraesCS6D01G200900.1 | Wheat | plastid | 85.22 | 60.49 |
| TraesCS2A01G239800.1 | Wheat | mitochondrion | 86.21 | 59.32 |
| TraesCS6D01G375100.1 | Wheat | mitochondrion | 85.22 | 55.99 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 72.41 | 40.27 |
| TraesCS7D01G238600.1 | Wheat | plasma membrane | 87.68 | 31.01 |
| BAC19893 | Rice | endoplasmic reticulum | 90.64 | 30.98 |
| HORVU2Hr1G086550.1 | Barley | plasma membrane | 89.16 | 30.73 |
| BAV58158 | Barley | plasma membrane | 89.16 | 30.73 |
| GRMZM5G867512_P01 | Maize | mitochondrion | 88.18 | 28.87 |
| HORVU2Hr1G070250.1 | Barley | extracellular, vacuole | 0.0 | 0.0 |
| ATMG00830.1 | Thale cress | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:2.4.4.2.3.2 | UniProt:A0A2P2CLH4 | ArrayExpress:ATMG00960 | EnsemblPlantsGene:ATMG00960 | RefSeq:ATMG00960 | TAIR:ATMG00960 |
| RefSeq:ATMG00960-TAIR-G | EnsemblPlants:ATMG00960.1 | TAIR:ATMG00960.1 | Symbol:CCB203 | InterPro:Cyt_c_assembly | InterPro:Cyt_c_biogenesis |
| InterPro:Cyt_c_biogenesis_plant | ProteinID:DAB41519.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0015232 | GO:GO:0015886 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0017004 | GO:GO:0020037 | PFAM:PF01578 |
| PRINTS:PR01410 | PRINTS:PR01412 | PANTHER:PTHR43653 | PANTHER:PTHR43653:SF1 | TMHMM:TMhelix | UniParc:UPI0000097261 |
Description
CCB203Cytochrome C assembly protein [Source:TAIR;Acc:ATMG00960]
Coordinates
chrMt:-:256865..257476
Molecular Weight (calculated)
23398.5 Da
IEP (calculated)
10.750
GRAVY (calculated)
0.033
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: VDTGREQAKR VVRNGKKETT TSPLCWTAGA NTVVSDQDQE PIRIWILTCW WFLTVGILPG SWWAYHELGR GGWWFRDPVE NASFMPRVLA TARIHSVILP
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.