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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
MultiLoc:extracellular
TargetP:secretory
YLoc:vacuole
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G115140.1 Barley plasma membrane, plastid, vacuole 88.1 88.1
HORVU4Hr1G044820.1 Barley plastid 34.52 34.94
GSMUA_AchrUn_... Banana plasma membrane 54.76 12.6
BAV58158 Barley plasma membrane 88.1 12.56
HORVU2Hr1G086550.1 Barley plasma membrane 88.1 12.56
TraesCS7D01G238600.1 Wheat plasma membrane 85.71 12.54
TraesCS2A01G239800.1 Wheat mitochondrion 29.76 8.47
TraesCS7D01G533300.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane 28.57 8.14
TraesCS1B01G451000.1 Wheat mitochondrion 28.57 8.14
TraesCS6D01G375100.1 Wheat mitochondrion 29.76 8.09
CDY45536 Canola mitochondrion 15.48 6.25
CDY17565 Canola mitochondrion 7.14 3.8
CDY17575 Canola mitochondrion 4.76 3.17
CDY69820 Canola mitochondrion 2.38 1.64
AT2G07768.1 Thale cress mitochondrion 2.38 1.3
HORVU4Hr1G044810.1 Barley vacuole 0.0 0.0
HORVU7Hr1G086940.1 Barley endoplasmic reticulum, plasma membrane, vacuole 0.0 0.0
HORVU6Hr1G037030.1 Barley cytosol 0.0 0.0
HORVU6Hr1G024690.1 Barley endoplasmic reticulum, extracellular, vacuole 0.0 0.0
HORVU5Hr1G112980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 0.0 0.0
HORVU5Hr1G058280.1 Barley extracellular, golgi, mitochondrion 0.0 0.0
HORVU4Hr1G044830.1 Barley mitochondrion, plasma membrane, vacuole 0.0 0.0
HORVU3Hr1G115160.1 Barley endoplasmic reticulum 0.0 0.0
HORVU3Hr1G055030.1 Barley mitochondrion, peroxisome, plastid, vacuole 0.0 0.0
HORVU2Hr1G070240.1 Barley golgi, mitochondrion, vacuole 0.0 0.0
ATMG00960.1 Thale cress cytosol, peroxisome, plasma membrane 0.0 0.0
Protein Annotations
MapMan:2.4.4.2.3.2UniProt:A0A287ICE1InterPro:Cyt_c_assemblyInterPro:Cyt_c_biogenesisInterPro:Cyt_c_biogenesis_plantGO:GO:0003674
GO:GO:0005215GO:GO:0005488GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0009987
GO:GO:0015232GO:GO:0015886GO:GO:0016020GO:GO:0016043GO:GO:0017004GO:GO:0020037
EnsemblPlantsGene:HORVU2Hr1G070250EnsemblPlants:HORVU2Hr1G070250.1PFAM:PF01578PRINTS:PR01410PRINTS:PR01412PANTHER:PTHR30009
PANTHER:PTHR30009:SF23UniParc:UPI000B4691C7SEG:seg:::
Description
No Description!
Coordinates
chrchr2H:-:495727677..495727928
Molecular Weight (calculated)
9202.2 Da
IEP (calculated)
8.249
GRAVY (calculated)
0.231
Length
84 amino acids
Sequence
(BLAST)
1: GIALFFSPFL SASSDVFVRN FFVHTEPLAE SNPVPQDPIL AIHPPCIYAE DVTNAMGFGL CRSKMLNGIV ALHFPPMRKN AAKK
Best Arabidopsis Sequence Match ( ATMG00830.1 )
(BLAST)
001: MSISIYEFFH YSLFPGLFVA FTYNKKQPPA FGAAPAFWCI LLSFLGLSFC HIPNNLSNYN VLTANAPFFY QISGTWSNHE GSILLWCRIP NFYGFFLCYR
101: GRPQSHNVLK QGGHRESLFF FFVSNFVKNS ILSLPRYEQE SGLKNQLYTP FVLRTLVDSE LRSRRNRTFD GPALFYAPLY PERKIKNPLD AWRSRGSREG
201: KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSPFLS ASSDPFVRNF FVCTEPLAES NPVPQDPISA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA
301: LHSPPMRKDA AEKNGTLLRS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY
Arabidopsis Description
CCB382CcmFN1 [Source:UniProtKB/TrEMBL;Acc:G1C2S2]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.