Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G070240.1 | Barley | golgi, mitochondrion, vacuole | 26.19 | 75.0 |
| CDY17565 | Canola | mitochondrion | 65.08 | 51.9 |
| HORVU5Hr1G058280.1 | Barley | extracellular, golgi, mitochondrion | 35.71 | 51.72 |
| HORVU3Hr1G055030.1 | Barley | mitochondrion, peroxisome, plastid, vacuole | 34.92 | 50.57 |
| CDY69820 | Canola | mitochondrion | 48.41 | 50.0 |
| AT2G07768.1 | Thale cress | mitochondrion | 58.73 | 48.05 |
| CDY45536 | Canola | mitochondrion | 66.67 | 40.38 |
| TraesCS7D01G533300.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 55.56 | 23.73 |
| TraesCS1B01G451000.1 | Wheat | mitochondrion | 55.56 | 23.73 |
| TraesCS2A01G239800.1 | Wheat | mitochondrion | 53.97 | 23.05 |
| TraesCS6D01G200900.1 | Wheat | plastid | 51.59 | 22.73 |
| TraesCS6D01G375100.1 | Wheat | mitochondrion | 52.38 | 21.36 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 53.97 | 18.63 |
| HORVU2Hr1G086550.1 | Barley | plasma membrane | 57.94 | 12.39 |
| BAV58158 | Barley | plasma membrane | 57.94 | 12.39 |
| TraesCS7D01G238600.1 | Wheat | plasma membrane | 56.35 | 12.37 |
| BAC19893 | Rice | endoplasmic reticulum | 57.94 | 12.29 |
| GRMZM5G867512_P01 | Maize | mitochondrion | 55.56 | 11.29 |
| HORVU2Hr1G070250.1 | Barley | extracellular, vacuole | 3.17 | 4.76 |
| CDY04726 | Canola | plastid | 2.38 | 3.53 |
| CDY17583 | Canola | mitochondrion | 3.17 | 2.01 |
| CDY45509 | Canola | endoplasmic reticulum, vacuole | 3.17 | 1.05 |
Protein Annotations
| MapMan:2.4.4.2.3.2 | GO:A0A078FST8 | UniProt:A0A078FST8 | EnsemblPlants:CDY17575 | ProteinID:CDY17575 | ProteinID:CDY17575.1 |
| InterPro:Cyt_c_biogenesis | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015232 | GO:GO:0015886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0017004 | EnsemblPlantsGene:GSBRNA2T00001764001 | PRINTS:PR01410 | PANTHER:PTHR43653 | PANTHER:PTHR43653:SF1 | TMHMM:TMhelix |
| UniParc:UPI0004EEB2F6 | : | : | : | : | : |
Description
BnaC01g26990DBnaC01g26990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FST8]
Coordinates
chrLK032075:+:654883..655584
Molecular Weight (calculated)
14319.6 Da
IEP (calculated)
11.778
GRAVY (calculated)
0.019
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKRPLLRL FVGPPARTQC RGGWWFRDPV ENASFMPRVF ATARTFSIRS GLLAPVHSFA TDDTRGIFLW WFFLLMTGIS MILFYQMKQQ ASSQQLAAGF
101: RPAMRQIASG GHCGVAECRA VRPYSV
101: RPAMRQIASG GHCGVAECRA VRPYSV
001: MERKRPLLRL FVGPPARTQW SGWLVVSGSR RNASFMPRVL ATARIHSVIL PLLHSWTSFL NIVTFPCCVS GTFSIRSGLL APVHSFATDD TRGIFLWWFF
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN
Arabidopsis Description
Cytochrome C assembly protein [Source:UniProtKB/TrEMBL;Acc:F4IL90]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.