Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G451000.1 | Wheat | mitochondrion | 96.95 | 96.95 |
| TraesCS7D01G533300.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 96.95 | 96.95 |
| HORVU3Hr1G055030.1 | Barley | mitochondrion, peroxisome, plastid, vacuole | 27.46 | 93.1 |
| HORVU2Hr1G070240.1 | Barley | golgi, mitochondrion, vacuole | 13.56 | 90.91 |
| TraesCS6D01G375100.1 | Wheat | mitochondrion | 92.54 | 88.35 |
| ATMG00960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 59.32 | 86.21 |
| AT2G07768.1 | Thale cress | mitochondrion | 38.31 | 73.38 |
| CDY69820 | Canola | mitochondrion | 26.44 | 63.93 |
| CDY17575 | Canola | mitochondrion | 23.05 | 53.97 |
| CDY17565 | Canola | mitochondrion | 27.12 | 50.63 |
| TraesCS7D01G238600.1 | Wheat | plasma membrane | 96.61 | 49.65 |
| BAC19893 | Rice | endoplasmic reticulum | 95.59 | 47.47 |
| GRMZM5G867512_P01 | Maize | mitochondrion | 91.86 | 43.71 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 51.19 | 41.37 |
| CDY45536 | Canola | mitochondrion | 28.81 | 40.87 |
| HORVU2Hr1G070250.1 | Barley | extracellular, vacuole | 8.47 | 29.76 |
Protein Annotations
| MapMan:2.4.4.2.3.2 | InterPro:Cyt_c_assembly | InterPro:Cyt_c_biogenesis | InterPro:Cyt_c_biogenesis_plant | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015232 |
| GO:GO:0015886 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0017004 | GO:GO:0020037 | PFAM:PF01578 |
| PRINTS:PR01410 | PRINTS:PR01412 | PANTHER:PTHR43653 | PANTHER:PTHR43653:SF1 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G239800 |
| EnsemblPlants:TraesCS2A01G239800.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:332947921..332948808
Molecular Weight (calculated)
33286.1 Da
IEP (calculated)
11.412
GRAVY (calculated)
0.098
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGLCRSKM MNGIVALHSP PMRKDAAEKN GTLLHSAGCV GSHIRSSLFT RSFKHFVGGA PALLLRSNRS LLMLLRRRFF AFSSLWTGAL MDTGREQAKR
101: VVRNGKKDTT TSPLCWTADV NTVVSDQDQE PIRIWILTCR LFLTVGISLG SWWAHHELGR GGWWFRDPVE NASFMPRILA TARIHSVILP LLHSWTSLLN
201: ILTLPCCVLG TFSIRSGLLA PVHSSATDDT RGRFLWRFFL LITGISMTLF YQMKQEALVR RTYKKEMVVA RSTLVHLCHS ARAQPRPVML CYGRI
101: VVRNGKKDTT TSPLCWTADV NTVVSDQDQE PIRIWILTCR LFLTVGISLG SWWAHHELGR GGWWFRDPVE NASFMPRILA TARIHSVILP LLHSWTSLLN
201: ILTLPCCVLG TFSIRSGLLA PVHSSATDDT RGRFLWRFFL LITGISMTLF YQMKQEALVR RTYKKEMVVA RSTLVHLCHS ARAQPRPVML CYGRI
001: MERKRPLLRL FVGPPARTQW SGWLVVSGSR RNASFMPRVL ATARIHSVIL PLLHSWTSFL NIVTFPCCVS GTFSIRSGLL APVHSFATDD TRGIFLWWFF
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN
Arabidopsis Description
Cytochrome C assembly protein [Source:UniProtKB/TrEMBL;Acc:F4IL90]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.