CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17565	Canola	mitochondrion	69.23	91.14
HORVU2Hr1G070240.1	Barley	golgi, mitochondrion, vacuole	15.87	75.0
CDY17575	Canola	mitochondrion	40.38	66.67
HORVU5Hr1G058280.1	Barley	extracellular, golgi, mitochondrion	21.63	51.72
HORVU3Hr1G055030.1	Barley	mitochondrion, peroxisome, plastid, vacuole	21.15	50.57
CDY69820	Canola	mitochondrion	26.92	45.9
AT2G07768.1	Thale cress	mitochondrion	26.92	36.36
TraesCS7D01G533300.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane	42.31	29.83
TraesCS1B01G451000.1	Wheat	mitochondrion	42.31	29.83
TraesCS6D01G200900.1	Wheat	plastid	40.38	29.37
TraesCS2A01G239800.1	Wheat	mitochondrion	40.87	28.81
TraesCS6D01G375100.1	Wheat	mitochondrion	40.87	27.51
TraesCS7D01G238600.1	Wheat	plasma membrane	44.71	16.2
BAC19893	Rice	endoplasmic reticulum	45.67	15.99
HORVU2Hr1G086550.1	Barley	plasma membrane	45.19	15.96
BAV58158	Barley	plasma membrane	45.19	15.96
GSMUA_AchrUn_...	Banana	plasma membrane	27.4	15.62
HORVU2Hr1G070250.1	Barley	extracellular, vacuole	6.25	15.48
GRMZM5G867512_P01	Maize	mitochondrion	44.23	14.84
CDY17583	Canola	mitochondrion	7.21	7.54
CDY04726	Canola	plastid	1.92	4.71
CDY45509	Canola	endoplasmic reticulum, vacuole	7.21	3.94

Protein Annotations

MapMan:2.4.4.2.3.2	GO:A0A078I6P9	UniProt:A0A078I6P9	EnsemblPlants:CDY45536	ProteinID:CDY45536	ProteinID:CDY45536.1
InterPro:Cyt_c_biogenesis	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0009987	GO:GO:0015232	GO:GO:0015886	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0017004	EnsemblPlantsGene:GSBRNA2T00082231001	PRINTS:PR01410	PANTHER:PTHR43653	PANTHER:PTHR43653:SF1	TMHMM:TMhelix
UniParc:UPI0004EEF178	SEG:seg	:	:	:	:

Description

BnaCnng12950DBnaCnng12950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6P9]

Coordinates

chrLK032627:-:175696..177662

Molecular Weight (calculated)

22968.2 Da

IEP (calculated)

11.871

GRAVY (calculated)

-0.001

Length

208 amino acids

Sequence
(BLAST)

001: MRRFISNSHL RPGIFLVLHH LPGVPLSRET GVPRESLLHK RLSSYRTLYV AMATFRPPFW NKGKPLSGPP LAPIRVQPFS LSGALVDTGR EQAKRVVRNG
101: KKETTTSPLC WTAGANTVVG VAATARTFSI RSGLLAPVHS FATDDTRGIF LWWFFLLMTG ISMILFYQMK QQASSQQLAA GFRPAMRQIA SGGHCGVAEC
201: RAVRPYSV

Best Arabidopsis Sequence Match ( AT2G07768.1 )
(BLAST)

001: MERKRPLLRL FVGPPARTQW SGWLVVSGSR RNASFMPRVL ATARIHSVIL PLLHSWTSFL NIVTFPCCVS GTFSIRSGLL APVHSFATDD TRGIFLWWFF
101: LLMTGISMIL FYQMKQQASV RRTYKKEMVV ARSTLVHLRH SARAQPRPVM LWKN

Arabidopsis Description

Cytochrome C assembly protein [Source:UniProtKB/TrEMBL;Acc:F4IL90]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.