Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
- mitochondrion 2
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G533300.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 94.41 | 91.53 |
| ATMG00960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 60.49 | 85.22 |
| TraesCS6D01G375100.1 | Wheat | mitochondrion | 91.26 | 84.47 |
| HORVU5Hr1G058280.1 | Barley | extracellular, golgi, mitochondrion | 25.52 | 83.91 |
| AT2G07768.1 | Thale cress | mitochondrion | 39.16 | 72.73 |
| CDY69820 | Canola | mitochondrion | 26.92 | 63.11 |
| CDY17575 | Canola | mitochondrion | 22.73 | 51.59 |
| CDY17565 | Canola | mitochondrion | 26.57 | 48.1 |
| TraesCS7D01G238600.1 | Wheat | plasma membrane | 94.06 | 46.86 |
| BAC19893 | Rice | endoplasmic reticulum | 94.06 | 45.29 |
| GRMZM5G867512_P01 | Maize | mitochondrion | 90.91 | 41.94 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 52.1 | 40.82 |
| CDY45536 | Canola | mitochondrion | 29.37 | 40.38 |
Protein Annotations
| MapMan:2.4.4.2.3.2 | InterPro:Cyt_c_assembly | InterPro:Cyt_c_biogenesis | InterPro:Cyt_c_biogenesis_plant | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015232 |
| GO:GO:0015886 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0017004 | GO:GO:0020037 | PFAM:PF01578 |
| PRINTS:PR01410 | PRINTS:PR01412 | PANTHER:PTHR43653 | PANTHER:PTHR43653:SF1 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G200900 |
| EnsemblPlants:TraesCS6D01G200900.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:283221230..283222090
Molecular Weight (calculated)
32415.0 Da
IEP (calculated)
11.750
GRAVY (calculated)
0.073
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNGIVALHS PPMRKDAAEK NGTLLRSAGY VGSHIRSSLF TRSFKHFVGG APALLLRSNR SLLMLLRRRF FAFSSLWTGA LMDTGREQAK RVVRDGKKDT
101: TTSPLCWTAG ANTVVSDQDQ EPIRIWMLTC WLFLTVGISP GSWWAHHELG RGGWWFRDLI KNASFMPRVL ATARIHSVIL PLLHFWTSLL NILTLPCCVL
201: GTFSIRSGLL APVHSSAIDD TRGRFLWRFF LLITGISMTL FYQMKQEASV HRTYKKEMVV ARSTLVHLRH SARAQPRPIM LCHGRI
101: TTSPLCWTAG ANTVVSDQDQ EPIRIWMLTC WLFLTVGISP GSWWAHHELG RGGWWFRDLI KNASFMPRVL ATARIHSVIL PLLHFWTSLL NILTLPCCVL
201: GTFSIRSGLL APVHSSAIDD TRGRFLWRFF LLITGISMTL FYQMKQEASV HRTYKKEMVV ARSTLVHLRH SARAQPRPIM LCHGRI
001: VDTGREQAKR VVRNGKKETT TSPLCWTAGA NTVVSDQDQE PIRIWILTCW WFLTVGILPG SWWAYHELGR GGWWFRDPVE NASFMPRVLA TARIHSVILP
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
Arabidopsis Description
CCB203Cytochrome C assembly protein [Source:TAIR;Acc:ATMG00960]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.