Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G533300.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane | 98.31 | 98.31 |
| TraesCS1B01G457900.1 | Wheat | mitochondrion | 98.31 | 98.31 |
| TraesCS2A01G239800.1 | Wheat | mitochondrion | 96.95 | 96.95 |
| HORVU3Hr1G055030.1 | Barley | mitochondrion, peroxisome, plastid, vacuole | 27.8 | 94.25 |
| HORVU2Hr1G070240.1 | Barley | golgi, mitochondrion, vacuole | 13.56 | 90.91 |
| TraesCS6D01G375100.1 | Wheat | mitochondrion | 94.24 | 89.97 |
| ATMG00960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 61.36 | 89.16 |
| AT2G07768.1 | Thale cress | mitochondrion | 39.32 | 75.32 |
| CDY69820 | Canola | mitochondrion | 27.12 | 65.57 |
| CDY17575 | Canola | mitochondrion | 23.73 | 55.56 |
| CDY17565 | Canola | mitochondrion | 27.46 | 51.27 |
| TraesCS7D01G238600.1 | Wheat | plasma membrane | 97.97 | 50.35 |
| BAC19893 | Rice | endoplasmic reticulum | 97.29 | 48.32 |
| GRMZM5G867512_P01 | Maize | mitochondrion | 93.56 | 44.52 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 52.88 | 42.74 |
| CDY45536 | Canola | mitochondrion | 29.83 | 42.31 |
| HORVU2Hr1G070250.1 | Barley | extracellular, vacuole | 8.14 | 28.57 |
| TraesCS4B01G146000.1 | Wheat | cytosol, plasma membrane, vacuole | 34.58 | 25.5 |
| TraesCS1B01G457800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| TraesCS3B01G374000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:2.4.4.2.3.2 | InterPro:Cyt_c_assembly | InterPro:Cyt_c_biogenesis | InterPro:Cyt_c_biogenesis_plant | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015232 |
| GO:GO:0015886 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0017004 | GO:GO:0020037 | PFAM:PF01578 |
| PRINTS:PR01410 | PRINTS:PR01412 | PANTHER:PTHR43653 | PANTHER:PTHR43653:SF1 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1B01G451000 |
| EnsemblPlants:TraesCS1B01G451000.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:668808804..668809691
Molecular Weight (calculated)
33259.0 Da
IEP (calculated)
11.798
GRAVY (calculated)
0.021
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGLCRSKM MNGIVALHSP PMRKDVAEKN GTLLRSAGCV GSHIRSSLFT RSFKHFVGGA PALLLRSNRS LLMQLRRRFF AFSSLWTGAL MDTGREQAKR
101: VVRNGKKDTT TSPLCWTAGA NTVVSDQDQE PIRIWILTCR LFLTVGISPG SWWAHHELGR GGWWFRDPVE NASFMPRVLA TARIHSVILP LLHSWTSLLN
201: ILTLPCCVLG TFSIRSGLLA PVHSSATDDT RGRFLWRFFL LITGISMTLF YQMKQEASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML CYGRI
101: VVRNGKKDTT TSPLCWTAGA NTVVSDQDQE PIRIWILTCR LFLTVGISPG SWWAHHELGR GGWWFRDPVE NASFMPRVLA TARIHSVILP LLHSWTSLLN
201: ILTLPCCVLG TFSIRSGLLA PVHSSATDDT RGRFLWRFFL LITGISMTLF YQMKQEASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML CYGRI
001: VDTGREQAKR VVRNGKKETT TSPLCWTAGA NTVVSDQDQE PIRIWILTCW WFLTVGILPG SWWAYHELGR GGWWFRDPVE NASFMPRVLA TARIHSVILP
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
Arabidopsis Description
CCB203Cytochrome C assembly protein [Source:TAIR;Acc:ATMG00960]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.