Factsheet for HORVU6Hr1G024690.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 3
extracellular 3
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G115160.1	Barley	endoplasmic reticulum	84.0	84.0
HORVU5Hr1G112980.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	80.0	81.08
TraesCS3B01G374000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	64.0	72.73
HORVU7Hr1G086940.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	82.67	53.91
TraesCS1B01G457800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	84.0	52.5
HORVU4Hr1G044810.1	Barley	vacuole	69.33	46.43
BAV58158	Barley	plasma membrane	84.0	10.7
HORVU2Hr1G086550.1	Barley	plasma membrane	84.0	10.7
Solyc10g048130.1.1	Tomato	mitochondrion, plastid	4.0	3.06
HORVU6Hr1G037030.1	Barley	cytosol	0.0	0.0
TraesCS1B01G457900.1	Wheat	mitochondrion	0.0	0.0
Solyc12g035910.1.1	Tomato	cytosol	0.0	0.0
Solyc12g035900.1.1	Tomato	cytosol	0.0	0.0
Solyc08g029270.1.1	Tomato	cytosol, extracellular, mitochondrion, plasma membrane	0.0	0.0
Solyc04g049870.1.1	Tomato	cytosol	0.0	0.0
HORVU2Hr1G070240.1	Barley	golgi, mitochondrion, vacuole	0.0	0.0
HORVU5Hr1G058280.1	Barley	extracellular, golgi, mitochondrion	0.0	0.0
HORVU4Hr1G044830.1	Barley	mitochondrion, plasma membrane, vacuole	0.0	0.0
HORVU4Hr1G044820.1	Barley	plastid	0.0	0.0
HORVU2Hr1G070250.1	Barley	extracellular, vacuole	0.0	0.0
HORVU3Hr1G115140.1	Barley	plasma membrane, plastid, vacuole	0.0	0.0
HORVU3Hr1G055030.1	Barley	mitochondrion, peroxisome, plastid, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G024690.1	EnsemblPlantsGene:HORVU6Hr1G024690	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0015232	GO:GO:0015886	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0017004	InterPro:Cyt_c_biogenesis_plant	PANTHER:PTHR30009	PANTHER:PTHR30009:SF23	PRINTS:PR01412
TMHMM:TMhelix	UniParc:UPI000B48444F	UniProt:A0A287TLP1	MapMan:2.4.4.2.3.2	:	:

Description

No Description!

Coordinates

chrchr6H:-:87515839..87516327

Molecular Weight (calculated)

8398.2 Da

IEP (calculated)

9.192

GRAVY (calculated)

0.336

Length

75 amino acids

Sequence
(BLAST)

1: MSINEFSHYS LFPGLFVAFI YNKKQPPAFG AALAFWCILL PFLGLSFRHI PNNLSNYNVL TANGPSMLSS THFQS

Best Arabidopsis Sequence Match ( ATMG00830.1 )
(BLAST)

001: MSISIYEFFH YSLFPGLFVA FTYNKKQPPA FGAAPAFWCI LLSFLGLSFC HIPNNLSNYN VLTANAPFFY QISGTWSNHE GSILLWCRIP NFYGFFLCYR
101: GRPQSHNVLK QGGHRESLFF FFVSNFVKNS ILSLPRYEQE SGLKNQLYTP FVLRTLVDSE LRSRRNRTFD GPALFYAPLY PERKIKNPLD AWRSRGSREG
201: KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSPFLS ASSDPFVRNF FVCTEPLAES NPVPQDPISA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA
301: LHSPPMRKDA AEKNGTLLRS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY

Arabidopsis Description

CCB382CcmFN1 [Source:UniProtKB/TrEMBL;Acc:G1C2S2]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.