Factsheet for HORVU5Hr1G112980.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

plastid 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 2
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G115160.1	Barley	endoplasmic reticulum	83.78	82.67
HORVU6Hr1G024690.1	Barley	endoplasmic reticulum, extracellular, vacuole	81.08	80.0
TraesCS3B01G374000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	62.16	69.7
HORVU7Hr1G086940.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	83.78	53.91
TraesCS1B01G457800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	83.78	51.67
HORVU4Hr1G044810.1	Barley	vacuole	67.57	44.64
BAV58158	Barley	plasma membrane	83.78	10.53
HORVU2Hr1G086550.1	Barley	plasma membrane	83.78	10.53
Solyc10g048130.1.1	Tomato	mitochondrion, plastid	4.05	3.06
HORVU6Hr1G037030.1	Barley	cytosol	0.0	0.0
TraesCS1B01G457900.1	Wheat	mitochondrion	0.0	0.0
Solyc12g035910.1.1	Tomato	cytosol	0.0	0.0
Solyc12g035900.1.1	Tomato	cytosol	0.0	0.0
Solyc08g029270.1.1	Tomato	cytosol, extracellular, mitochondrion, plasma membrane	0.0	0.0
Solyc04g049870.1.1	Tomato	cytosol	0.0	0.0
HORVU2Hr1G070240.1	Barley	golgi, mitochondrion, vacuole	0.0	0.0
HORVU5Hr1G058280.1	Barley	extracellular, golgi, mitochondrion	0.0	0.0
HORVU4Hr1G044830.1	Barley	mitochondrion, plasma membrane, vacuole	0.0	0.0
HORVU4Hr1G044820.1	Barley	plastid	0.0	0.0
HORVU2Hr1G070250.1	Barley	extracellular, vacuole	0.0	0.0
HORVU3Hr1G115140.1	Barley	plasma membrane, plastid, vacuole	0.0	0.0
HORVU3Hr1G055030.1	Barley	mitochondrion, peroxisome, plastid, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G112980.1	EnsemblPlantsGene:HORVU5Hr1G112980	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0009987	GO:GO:0015232	GO:GO:0015886	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0017004	InterPro:Cyt_c_biogenesis_plant	PANTHER:PTHR30009	PANTHER:PTHR30009:SF23	PRINTS:PR01412
TMHMM:TMhelix	UniParc:UPI000B470290	UniProt:A0A287SRU2	MapMan:2.4.4.2.3.2	:	:

Description

No Description!

Coordinates

chrchr5H:+:640700457..640700814

Molecular Weight (calculated)

8428.3 Da

IEP (calculated)

9.190

GRAVY (calculated)

0.396

Length

74 amino acids

Sequence
(BLAST)

1: MSINEFSHYS LFPGLFVAFT YNKKQPPVFG ASLAFWCILL PFIGLSFRHI PNNLSNYNVL TANAPFLSNL RDMI

Best Arabidopsis Sequence Match ( ATMG00830.1 )
(BLAST)

001: MSISIYEFFH YSLFPGLFVA FTYNKKQPPA FGAAPAFWCI LLSFLGLSFC HIPNNLSNYN VLTANAPFFY QISGTWSNHE GSILLWCRIP NFYGFFLCYR
101: GRPQSHNVLK QGGHRESLFF FFVSNFVKNS ILSLPRYEQE SGLKNQLYTP FVLRTLVDSE LRSRRNRTFD GPALFYAPLY PERKIKNPLD AWRSRGSREG
201: KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSPFLS ASSDPFVRNF FVCTEPLAES NPVPQDPISA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA
301: LHSPPMRKDA AEKNGTLLRS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY

Arabidopsis Description

CCB382CcmFN1 [Source:UniProtKB/TrEMBL;Acc:G1C2S2]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.