Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- plasma membrane 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g065880.1.1 | Tomato | cytosol | 13.29 | 33.33 |
| TraesCS1B01G457900.1 | Wheat | mitochondrion | 41.04 | 24.07 |
| HORVU4Hr1G044830.1 | Barley | mitochondrion, plasma membrane, vacuole | 11.56 | 22.99 |
| Solyc11g063630.1.1 | Tomato | mitochondrion | 31.79 | 20.22 |
| HORVU4Hr1G044820.1 | Barley | plastid | 8.09 | 16.87 |
| Solyc04g049870.1.1 | Tomato | cytosol | 12.14 | 10.29 |
| Solyc10g048130.1.1 | Tomato | mitochondrion, plastid | 3.47 | 6.12 |
| Solyc08g029270.1.1 | Tomato | cytosol, extracellular, mitochondrion, plasma membrane | 2.31 | 5.88 |
| Solyc02g050290.1.1 | Tomato | cytosol | 3.47 | 5.5 |
| Solyc03g013380.1.1 | Tomato | extracellular, vacuole | 1.16 | 2.7 |
| HORVU7Hr1G086940.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| HORVU6Hr1G024690.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 0.0 | 0.0 |
| Solyc11g063620.1.1 | Tomato | plasma membrane | 0.0 | 0.0 |
| HORVU5Hr1G112980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| Solyc12g035910.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| TraesCS1B01G457800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
| HORVU4Hr1G044810.1 | Barley | vacuole | 0.0 | 0.0 |
| TraesCS3B01G374000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc12g035900.1.1 | EnsemblPlantsGene:Solyc12g035900.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | TMHMM:TMhelix |
| UniParc:UPI000276A003 | UniProt:K4DE47 | MapMan:2.4.4.2.3.2 | : | : | : |
Description
No Description!
Coordinates
chr12:+:54279973..54280710
Molecular Weight (calculated)
20038.7 Da
IEP (calculated)
10.010
GRAVY (calculated)
0.239
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNGIVELHS SAMRKDAPKK LNTVSLYWMR RISYNKQDIY PKIQTCGGNK YTTTLPICWT AGMSIVVSDY DHEPIRILTL TCRWFLTIGI LTKVSRHIMN
101: RVGVQVVSVS HRKCFFYALG ISHISYSFRI FSIHSVFLAP VHCFATDDTR GIFSWRLLIY HGFTVFLMLF PYV
101: RVGVQVVSVS HRKCFFYALG ISHISYSFRI FSIHSVFLAP VHCFATDDTR GIFSWRLLIY HGFTVFLMLF PYV
001: VDTGREQAKR VVRNGKKETT TSPLCWTAGA NTVVSDQDQE PIRIWILTCW WFLTVGILPG SWWAYHELGR GGWWFRDPVE NASFMPRVLA TARIHSVILP
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
101: LLHSWTSFLN IVTFPCCVSG TFSIRSGLLA PVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML
201: WKN
Arabidopsis Description
CCB203Cytochrome C assembly protein [Source:TAIR;Acc:ATMG00960]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.