Factsheet for HORVU3Hr1G115140.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
BAV58158
HORVU0Hr1G010690.1
HORVU1Hr1G025070.1
HORVU2Hr1G070240.1
HORVU2Hr1G070250.1
HORVU2Hr1G086550.1
HORVU3Hr1G055030.1
HORVU5Hr1G058280.1
HORVU6Hr1G037070.1
HORVU7Hr1G067010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATMG00830.1	HORVU0Hr1G010690.1	ATMG00180.1	18644794
ATMG00830.1	HORVU1Hr1G025070.1	ATMG00180.1	18644794
ATMG00830.1	HORVU6Hr1G037070.1	ATMG00180.1	18644794
ATMG00830.1	HORVU7Hr1G067010.1	ATMG00180.1	18644794
ATMG00830.1	BAV58158	ATMG00960.1	18644794
ATMG00830.1	HORVU2Hr1G070240.1	ATMG00960.1	18644794
ATMG00830.1	HORVU2Hr1G070250.1	ATMG00960.1	18644794
ATMG00830.1	HORVU2Hr1G086550.1	ATMG00960.1	18644794
ATMG00830.1	HORVU3Hr1G055030.1	ATMG00960.1	18644794
ATMG00830.1	HORVU5Hr1G058280.1	ATMG00960.1	18644794

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G070250.1	Barley	extracellular, vacuole	88.1	88.1
CDY17583	Canola	mitochondrion	97.62	41.21
HORVU4Hr1G044820.1	Barley	plastid	39.29	39.76
Solyc06g065880.1.1	Tomato	cytosol	21.43	26.09
CDY45509	Canola	endoplasmic reticulum, vacuole	97.62	21.52
ATMG00830.1	Thale cress	endoplasmic reticulum, vacuole	97.62	21.47
TraesCS4B01G146000.1	Wheat	cytosol, plasma membrane, vacuole	98.81	20.75
VIT_00s0246g00060.t01	Wine grape	mitochondrion	94.05	20.15
PGSC0003DMT400043522	Potato	peroxisome	98.81	18.86
VIT_00s0332g00130.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	94.05	18.12
HORVU2Hr1G086550.1	Barley	plasma membrane	100.0	14.26
BAV58158	Barley	plasma membrane	100.0	14.26
HORVU4Hr1G044810.1	Barley	vacuole	0.0	0.0
HORVU3Hr1G115160.1	Barley	endoplasmic reticulum	0.0	0.0
HORVU4Hr1G044830.1	Barley	mitochondrion, plasma membrane, vacuole	0.0	0.0
HORVU5Hr1G058280.1	Barley	extracellular, golgi, mitochondrion	0.0	0.0
HORVU5Hr1G112980.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	0.0	0.0
HORVU6Hr1G024690.1	Barley	endoplasmic reticulum, extracellular, vacuole	0.0	0.0
HORVU6Hr1G037030.1	Barley	cytosol	0.0	0.0
HORVU7Hr1G086940.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	0.0	0.0
HORVU3Hr1G055030.1	Barley	mitochondrion, peroxisome, plastid, vacuole	0.0	0.0
HORVU2Hr1G070240.1	Barley	golgi, mitochondrion, vacuole	0.0	0.0
GSMUA_Achr5P20920_001	Banana	cytosol, plasma membrane, vacuole	0.0	0.0

Protein Annotations

MapMan:2.4.4.2.3.2	InterPro:Cyt_c_assembly	InterPro:Cyt_c_biogenesis	InterPro:Cyt_c_biogenesis_plant	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0015232
GO:GO:0015886	GO:GO:0016020	GO:GO:0016043	GO:GO:0017004	GO:GO:0020037	EnsemblPlantsGene:HORVU3Hr1G115140
EnsemblPlants:HORVU3Hr1G115140.1	UniProt:M0WAF3	PFAM:PF01578	PRINTS:PR01410	PRINTS:PR01412	PANTHER:PTHR30009
PANTHER:PTHR30009:SF23	UniParc:UPI000294BC63	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:692668140..692668391

Molecular Weight (calculated)

9023.9 Da

IEP (calculated)

7.418

GRAVY (calculated)

0.130

Length

84 amino acids

Sequence
(BLAST)

1: GIALFFSPFL SASSDPFVRN FFVRTEPLAE SNPVPQDPIS AIHPPCIYAG DVASAMGFGL CRSKMMNGIV ALHSPPMRKD AAEK

Best Arabidopsis Sequence Match ( ATMG00830.1 )
(BLAST)

001: MSISIYEFFH YSLFPGLFVA FTYNKKQPPA FGAAPAFWCI LLSFLGLSFC HIPNNLSNYN VLTANAPFFY QISGTWSNHE GSILLWCRIP NFYGFFLCYR
101: GRPQSHNVLK QGGHRESLFF FFVSNFVKNS ILSLPRYEQE SGLKNQLYTP FVLRTLVDSE LRSRRNRTFD GPALFYAPLY PERKIKNPLD AWRSRGSREG
201: KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSPFLS ASSDPFVRNF FVCTEPLAES NPVPQDPISA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA
301: LHSPPMRKDA AEKNGTLLRS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY

Arabidopsis Description

CCB382CcmFN1 [Source:UniProtKB/TrEMBL;Acc:G1C2S2]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.