Factsheet for HORVU1Hr1G025070.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
BAV58158
HORVU2Hr1G070240.1
HORVU2Hr1G070250.1
HORVU2Hr1G086550.1
HORVU3Hr1G055030.1
HORVU5Hr1G058280.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATMG00180.1	BAV58158	ATMG00960.1	18644794
ATMG00180.1	HORVU2Hr1G070240.1	ATMG00960.1	18644794
ATMG00180.1	HORVU2Hr1G070250.1	ATMG00960.1	18644794
ATMG00180.1	HORVU2Hr1G086550.1	ATMG00960.1	18644794
ATMG00180.1	HORVU3Hr1G055030.1	ATMG00960.1	18644794
ATMG00180.1	HORVU5Hr1G058280.1	ATMG00960.1	18644794

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G131500.1	Wheat	endoplasmic reticulum, extracellular	94.98	94.55
TraesCS3B01G121300.1	Wheat	endoplasmic reticulum	94.52	94.09
TraesCSU01G050200.1	Wheat	endoplasmic reticulum, extracellular	88.58	92.82
TraesCS6B01G131800.1	Wheat	endoplasmic reticulum, extracellular	88.13	91.9
TraesCS7B01G429400.1	Wheat	extracellular	87.67	91.87
TraesCS6D01G324000.1	Wheat	endoplasmic reticulum, extracellular	87.67	91.87
TraesCS1B01G065500.1	Wheat	extracellular	84.93	89.86
HORVU0Hr1G010690.1	Barley	endoplasmic reticulum, extracellular, vacuole	88.58	88.99
HORVU7Hr1G067010.1	Barley	extracellular, plasma membrane, vacuole	89.5	71.01
HORVU6Hr1G037070.1	Barley	extracellular, plasma membrane, vacuole	85.39	68.0
VIT_03s0063g02270.t01	Wine grape	extracellular	19.63	62.32
BAC19894	Rice	endoplasmic reticulum, plasma membrane	88.58	44.5
PGSC0003DMT400087800	Potato	cytosol, mitochondrion, plastid, vacuole	68.95	37.56
Solyc11g039360.1.1	Tomato	vacuole	57.99	36.92
ATMG00180.1	Thale cress	plasma membrane	73.06	35.4
CDY45515	Canola	mitochondrion	31.05	33.33
CDY17587	Canola	mitochondrion	31.05	33.33
AT2G07815.1	Thale cress	mitochondrion	31.05	24.37
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	33.79	22.22

Protein Annotations

EnsemblPlants:HORVU1Hr1G025070.1	EnsemblPlantsGene:HORVU1Hr1G025070	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR36010
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B45FCEF	UniProt:A0A287EYI3	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:119694195..119695018

Molecular Weight (calculated)

24853.8 Da

IEP (calculated)

11.367

GRAVY (calculated)

-0.027

Length

219 amino acids

Sequence
(BLAST)

001: MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI PLFPFLVYLH LRKFIRSMDR AKSGVLVKAS RPILLPDKME RSSSARNALF
101: RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPRRVVLVW
201: GVCHQKAGLK LSPYQRADC

Best Arabidopsis Sequence Match ( ATMG00180.1 )
(BLAST)

001: MVQLHNFFFF IIFMVVPCGT AAPVLLKWFV SRDVPTGAPF SNGTIIPIPI SSFPLLVYLH SRKIIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK
101: ALFFFVPVLH FRLLESKGDF SYLESFCGVL CLLFFRTFLF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE
201: LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGYELHMG KERCCLRGLD HLHGPTFHSI
301: CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA SIGTGSSRTG
401: GWYTTIMKLP FIFFIRIGFM LASLGGSPSL LRQLQKDKLR WNRESSVEFI IA

Arabidopsis Description

CCB452CcmFC [Source:UniProtKB/TrEMBL;Acc:G1C2X7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.