Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17587 | Canola | mitochondrion | 61.65 | 84.31 |
| CDY45515 | Canola | mitochondrion | 61.65 | 84.31 |
| VIT_03s0063g02270.t01 | Wine grape | extracellular | 16.49 | 66.67 |
| TraesCS6B01G232500.1 | Wheat | extracellular | 24.37 | 34.17 |
| TraesCSU01G050200.1 | Wheat | endoplasmic reticulum, extracellular | 24.37 | 32.54 |
| TraesCS7B01G429400.1 | Wheat | extracellular | 24.37 | 32.54 |
| TraesCS6B01G131800.1 | Wheat | endoplasmic reticulum, extracellular | 24.37 | 32.38 |
| TraesCS6D01G324000.1 | Wheat | endoplasmic reticulum, extracellular | 24.01 | 32.06 |
| TraesCS1B01G065500.1 | Wheat | extracellular | 23.66 | 31.88 |
| HORVU1Hr1G025070.1 | Barley | extracellular | 24.37 | 31.05 |
| TraesCS3B01G121300.1 | Wheat | endoplasmic reticulum | 24.37 | 30.91 |
| TraesCS6B01G131500.1 | Wheat | endoplasmic reticulum, extracellular | 24.37 | 30.91 |
| HORVU0Hr1G010690.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 22.94 | 29.36 |
| TraesCS2A01G330700.1 | Wheat | extracellular | 24.37 | 24.82 |
| TraesCS1B01G188800.1 | Wheat | extracellular, plasma membrane, vacuole | 24.37 | 24.73 |
| TraesCS1D01G128300.1 | Wheat | extracellular, plasma membrane, vacuole | 24.37 | 24.73 |
| TraesCS3B01G121800.1 | Wheat | extracellular, plasma membrane, vacuole | 24.37 | 24.64 |
| TraesCS6B01G357400.1 | Wheat | extracellular, plasma membrane, vacuole | 24.01 | 24.54 |
| TraesCS2A01G509000.1 | Wheat | endoplasmic reticulum, extracellular | 24.01 | 24.45 |
| TraesCS1B01G475500.1 | Wheat | extracellular, plasma membrane, vacuole | 24.01 | 24.36 |
| TraesCS4D01G161300.1 | Wheat | plasma membrane | 24.01 | 24.28 |
| HORVU7Hr1G067010.1 | Barley | extracellular, plasma membrane, vacuole | 24.01 | 24.28 |
| TraesCS3D01G197300.1 | Wheat | extracellular | 23.66 | 24.0 |
| TraesCS5D01G003300.1 | Wheat | extracellular, plasma membrane, vacuole | 23.66 | 24.0 |
| TraesCS1B01G352800.1 | Wheat | extracellular | 23.66 | 24.0 |
| HORVU6Hr1G037070.1 | Barley | extracellular, plasma membrane, vacuole | 23.66 | 24.0 |
| TraesCS7B01G047700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 22.58 | 23.86 |
| TraesCS3A01G218900.3 | Wheat | extracellular | 22.94 | 23.44 |
| TraesCS4D01G146500.1 | Wheat | endoplasmic reticulum | 22.94 | 23.36 |
| TraesCS3D01G103300.1 | Wheat | endoplasmic reticulum, vacuole | 24.01 | 22.79 |
| TraesCS1A01G145400.1 | Wheat | plasma membrane, vacuole | 22.22 | 22.71 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 22.58 | 18.92 |
| ATMG00180.1 | Thale cress | plasma membrane | 29.39 | 18.14 |
| BAC19894 | Rice | endoplasmic reticulum, plasma membrane | 25.81 | 16.51 |
| PGSC0003DMT400087800 | Potato | cytosol, mitochondrion, plastid, vacuole | 23.3 | 16.17 |
| Solyc11g039360.1.1 | Tomato | vacuole | 13.26 | 10.76 |
Protein Annotations
| ArrayExpress:AT2G07815 | EnsemblPlants:AT2G07815.1 | EnsemblPlantsGene:AT2G07815 | EntrezGene:6240292 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR36010 | ProteinID:AEC06105.1 | RefSeq:AT2G07815 | RefSeq:AT2G07815-TAIR-G | RefSeq:NP_001118286.2 |
| SEG:seg | TAIR:AT2G07815 | TAIR:AT2G07815.1 | TMHMM:TMhelix | UniParc:UPI0001E92C8E | UniProt:F4IMD2 |
| MapMan:35.1 | : | : | : | : | : |
Description
BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryo /.../2996 (source: NCBI BLink). [Source:TAIR;Acc:AT2G07815]
Coordinates
chr2:-:3443688..3446183
Molecular Weight (calculated)
31427.2 Da
IEP (calculated)
10.845
GRAVY (calculated)
-0.284
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSECLFRNR RLFGLFVKAQ RNSKHCSCSE EVQFQRWLGS KEVAEPRTKA RNAFSPMNEE MTRRIRSETN SLVSFMYLLA AFAANSQAGE TLSPGSGIDW
101: FRADSGSCCL DYRRIRGAVL GKEMTQLQKK KDRCRLPTRA RSSIGGQEPW SGGKTEVRLL FFREAKLERI EQMVQLHNFF FFIIFMVVPC GTAAPVLLKW
201: FVSRDVPTGA PFSNGTIIPI PISSFPLLVY LHSRKIIRSM DGAKSGVLHA IGQRSVSGRG EGKAKHFGRT GMSNDEMTR
101: FRADSGSCCL DYRRIRGAVL GKEMTQLQKK KDRCRLPTRA RSSIGGQEPW SGGKTEVRLL FFREAKLERI EQMVQLHNFF FFIIFMVVPC GTAAPVLLKW
201: FVSRDVPTGA PFSNGTIIPI PISSFPLLVY LHSRKIIRSM DGAKSGVLHA IGQRSVSGRG EGKAKHFGRT GMSNDEMTR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.