Factsheet for VIT_03s0063g02270.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17587	Canola	mitochondrion	65.22	22.06
CDY45515	Canola	mitochondrion	65.22	22.06
TraesCS6B01G232500.1	Wheat	extracellular	62.32	21.61
TraesCS1B01G065500.1	Wheat	extracellular	62.32	20.77
TraesCSU01G050200.1	Wheat	endoplasmic reticulum, extracellular	62.32	20.57
TraesCS7B01G429400.1	Wheat	extracellular	62.32	20.57
TraesCS6D01G324000.1	Wheat	endoplasmic reticulum, extracellular	62.32	20.57
TraesCS6B01G131800.1	Wheat	endoplasmic reticulum, extracellular	62.32	20.48
HORVU1Hr1G025070.1	Barley	extracellular	62.32	19.63
TraesCS6B01G131500.1	Wheat	endoplasmic reticulum, extracellular	62.32	19.55
TraesCS3B01G121300.1	Wheat	endoplasmic reticulum	60.87	19.09
HORVU0Hr1G010690.1	Barley	endoplasmic reticulum, extracellular, vacuole	59.42	18.81
AT2G07815.1	Thale cress	mitochondrion	66.67	16.49
TraesCS6B01G357400.1	Wheat	extracellular, plasma membrane, vacuole	62.32	15.75
TraesCS2A01G509000.1	Wheat	endoplasmic reticulum, extracellular	62.32	15.69
TraesCS1B01G188800.1	Wheat	extracellular, plasma membrane, vacuole	62.32	15.64
TraesCS5D01G003300.1	Wheat	extracellular, plasma membrane, vacuole	62.32	15.64
TraesCS1D01G128300.1	Wheat	extracellular, plasma membrane, vacuole	62.32	15.64
TraesCS4D01G161300.1	Wheat	plasma membrane	62.32	15.58
TraesCS3B01G121800.1	Wheat	extracellular, plasma membrane, vacuole	62.32	15.58
TraesCS2A01G330700.1	Wheat	extracellular	60.87	15.33
TraesCS1B01G475500.1	Wheat	extracellular, plasma membrane, vacuole	60.87	15.27
HORVU6Hr1G037070.1	Barley	extracellular, plasma membrane, vacuole	60.87	15.27
HORVU7Hr1G067010.1	Barley	extracellular, plasma membrane, vacuole	60.87	15.22
TraesCS7B01G047700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.97	15.15
TraesCS4D01G146500.1	Wheat	endoplasmic reticulum	59.42	14.96
TraesCS1B01G352800.1	Wheat	extracellular	59.42	14.91
TraesCS3A01G218900.3	Wheat	extracellular	57.97	14.65
TraesCS1A01G145400.1	Wheat	plasma membrane, vacuole	57.97	14.65
TraesCS3D01G103300.1	Wheat	endoplasmic reticulum, vacuole	62.32	14.63
TraesCS3D01G197300.1	Wheat	extracellular	57.97	14.55
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	62.32	12.91
BAC19894	Rice	endoplasmic reticulum, plasma membrane	62.32	9.86
PGSC0003DMT400087800	Potato	cytosol, mitochondrion, plastid, vacuole	52.17	8.96
Solyc11g039360.1.1	Tomato	vacuole	27.54	5.52

Protein Annotations

ArrayExpress:VIT_03s0063g02270	EMBL:FN596006	EnsemblPlants:VIT_03s0063g02270.t01	EnsemblPlantsGene:VIT_03s0063g02270	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR36010
ProteinID:CBI32564	ProteinID:CBI32564.3	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001BE3CD4
UniProt:D7TPZ1	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3:+:5536347..5538415

Molecular Weight (calculated)

7901.8 Da

IEP (calculated)

10.129

GRAVY (calculated)

0.662

Length

69 amino acids

Sequence
(BLAST)

1: MVQLHNSFFF IISMFVPCGT TSPALWKWFI SREILIDVPS SNGTIISIPI PSFPLLVYLH SKKFVRFAN

Best Arabidopsis Sequence Match ( AT2G07815.1 )
(BLAST)

001: MVSECLFRNR RLFGLFVKAQ RNSKHCSCSE EVQFQRWLGS KEVAEPRTKA RNAFSPMNEE MTRRIRSETN SLVSFMYLLA AFAANSQAGE TLSPGSGIDW
101: FRADSGSCCL DYRRIRGAVL GKEMTQLQKK KDRCRLPTRA RSSIGGQEPW SGGKTEVRLL FFREAKLERI EQMVQLHNFF FFIIFMVVPC GTAAPVLLKW
201: FVSRDVPTGA PFSNGTIIPI PISSFPLLVY LHSRKIIRSM DGAKSGVLHA IGQRSVSGRG EGKAKHFGRT GMSNDEMTR

Arabidopsis Description

BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryo /.../2996 (source: NCBI BLink). [Source:TAIR;Acc:AT2G07815]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.