Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G067010.1 | Barley | extracellular, plasma membrane, vacuole | 48.55 | 60.51 |
| TraesCS1D01G128300.1 | Wheat | extracellular, plasma membrane, vacuole | 48.26 | 60.36 |
| TraesCS1B01G352800.1 | Wheat | extracellular | 48.26 | 60.36 |
| TraesCS1B01G188800.1 | Wheat | extracellular, plasma membrane, vacuole | 48.26 | 60.36 |
| TraesCS3B01G121800.1 | Wheat | extracellular, plasma membrane, vacuole | 48.26 | 60.14 |
| TraesCS1B01G475500.1 | Wheat | extracellular, plasma membrane, vacuole | 47.97 | 60.0 |
| TraesCS2A01G330700.1 | Wheat | extracellular | 47.67 | 59.85 |
| TraesCS3D01G197300.1 | Wheat | extracellular | 47.67 | 59.64 |
| TraesCS2A01G509000.1 | Wheat | endoplasmic reticulum, extracellular | 47.38 | 59.49 |
| TraesCS6B01G232500.1 | Wheat | extracellular | 34.3 | 59.3 |
| TraesCS4D01G146500.1 | Wheat | endoplasmic reticulum | 47.09 | 59.12 |
| TraesCS5D01G003300.1 | Wheat | extracellular, plasma membrane, vacuole | 47.09 | 58.91 |
| TraesCSU01G050200.1 | Wheat | endoplasmic reticulum, extracellular | 35.76 | 58.85 |
| TraesCS7B01G429400.1 | Wheat | extracellular | 35.76 | 58.85 |
| TraesCS6B01G357400.1 | Wheat | extracellular, plasma membrane, vacuole | 46.51 | 58.61 |
| TraesCS6B01G131800.1 | Wheat | endoplasmic reticulum, extracellular | 35.76 | 58.57 |
| TraesCS6D01G324000.1 | Wheat | endoplasmic reticulum, extracellular | 35.47 | 58.37 |
| TraesCS6B01G131500.1 | Wheat | endoplasmic reticulum, extracellular | 37.21 | 58.18 |
| HORVU1Hr1G025070.1 | Barley | extracellular | 36.92 | 57.99 |
| TraesCS4D01G161300.1 | Wheat | plasma membrane | 46.51 | 57.97 |
| TraesCS3A01G218900.3 | Wheat | extracellular | 45.93 | 57.88 |
| TraesCS3B01G121300.1 | Wheat | endoplasmic reticulum | 36.92 | 57.73 |
| TraesCS7B01G047700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.19 | 57.58 |
| TraesCS1B01G065500.1 | Wheat | extracellular | 34.59 | 57.49 |
| HORVU6Hr1G037070.1 | Barley | extracellular, plasma membrane, vacuole | 45.93 | 57.45 |
| HORVU0Hr1G010690.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 36.34 | 57.34 |
| TraesCS3D01G103300.1 | Wheat | endoplasmic reticulum, vacuole | 48.55 | 56.8 |
| PGSC0003DMT400087800 | Potato | cytosol, mitochondrion, plastid, vacuole | 63.08 | 53.98 |
| TraesCS1A01G145400.1 | Wheat | plasma membrane, vacuole | 42.73 | 53.85 |
| BAC19894 | Rice | endoplasmic reticulum, plasma membrane | 52.33 | 41.28 |
| VIT_03s0063g02270.t01 | Wine grape | extracellular | 5.52 | 27.54 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 22.09 | 22.82 |
| CDY45515 | Canola | mitochondrion | 10.76 | 18.14 |
| CDY17587 | Canola | mitochondrion | 10.76 | 18.14 |
| AT2G07815.1 | Thale cress | mitochondrion | 10.76 | 13.26 |
Protein Annotations
| EnsemblPlants:Solyc11g039360.1.1 | EnsemblPlantsGene:Solyc11g039360.1 | PANTHER:PTHR36010 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0002769C79 |
| UniProt:K4D7R6 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:45247703..45249546
Molecular Weight (calculated)
38594.8 Da
IEP (calculated)
9.893
GRAVY (calculated)
-0.085
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQLHNFFFF ITSVVVPRGT ASPVLLKWFV SRDVPTGNSY APRTEQKGRL LVRASRPILL PDIIGRSSSQ TRARDALFRF VPVLHFLLLE SKGDFSYFES
101: FCGVLRLLFF RTFFFLPRDR SAKPERARRR KGQTLRPNGN EKRRNEKMRC LGHPHLERRV EGFGPVAFAV PPSSGGPCVE GAPPEIGLEA LTLPTSRELM
201: AVGHDYYQKA PMKMNISHGG VCIFMLGVLL SCEPAAYVRP VAHASYLFRA GSVNSDSIRM LSHSKSRISS SPHVLGTEES HVDRPEHSPA LRSPLELELG
301: LLDALLLSSE LNYFGSDAFD QMEGWMPAFS DFVRSFLLYL FAMA
101: FCGVLRLLFF RTFFFLPRDR SAKPERARRR KGQTLRPNGN EKRRNEKMRC LGHPHLERRV EGFGPVAFAV PPSSGGPCVE GAPPEIGLEA LTLPTSRELM
201: AVGHDYYQKA PMKMNISHGG VCIFMLGVLL SCEPAAYVRP VAHASYLFRA GSVNSDSIRM LSHSKSRISS SPHVLGTEES HVDRPEHSPA LRSPLELELG
301: LLDALLLSSE LNYFGSDAFD QMEGWMPAFS DFVRSFLLYL FAMA
001: MVQLHNFFFF IIFMVVPCGT AAPVLLKWFV SRDVPTGAPF SNGTIIPIPI SSFPLLVYLH SRKIIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK
101: ALFFFVPVLH FRLLESKGDF SYLESFCGVL CLLFFRTFLF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE
201: LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGYELHMG KERCCLRGLD HLHGPTFHSI
301: CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA SIGTGSSRTG
401: GWYTTIMKLP FIFFIRIGFM LASLGGSPSL LRQLQKDKLR WNRESSVEFI IA
101: ALFFFVPVLH FRLLESKGDF SYLESFCGVL CLLFFRTFLF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE
201: LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGYELHMG KERCCLRGLD HLHGPTFHSI
301: CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA SIGTGSSRTG
401: GWYTTIMKLP FIFFIRIGFM LASLGGSPSL LRQLQKDKLR WNRESSVEFI IA
Arabidopsis Description
CCB452CcmFC [Source:UniProtKB/TrEMBL;Acc:G1C2X7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.