CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17587	Canola	mitochondrion	100.0	100.0
VIT_03s0063g02270.t01	Wine grape	extracellular	22.06	65.22
AT2G07815.1	Thale cress	mitochondrion	84.31	61.65
TraesCS6B01G232500.1	Wheat	extracellular	33.33	34.17
TraesCS7B01G429400.1	Wheat	extracellular	33.33	32.54
TraesCSU01G050200.1	Wheat	endoplasmic reticulum, extracellular	33.33	32.54
TraesCS6B01G131800.1	Wheat	endoplasmic reticulum, extracellular	33.33	32.38
TraesCS6D01G324000.1	Wheat	endoplasmic reticulum, extracellular	32.84	32.06
TraesCS1B01G065500.1	Wheat	extracellular	32.35	31.88
HORVU1Hr1G025070.1	Barley	extracellular	33.33	31.05
TraesCS6B01G131500.1	Wheat	endoplasmic reticulum, extracellular	33.33	30.91
TraesCS3B01G121300.1	Wheat	endoplasmic reticulum	33.33	30.91
HORVU0Hr1G010690.1	Barley	endoplasmic reticulum, extracellular, vacuole	31.37	29.36
TraesCS2A01G330700.1	Wheat	extracellular	33.33	24.82
TraesCS1B01G188800.1	Wheat	extracellular, plasma membrane, vacuole	33.33	24.73
TraesCS1D01G128300.1	Wheat	extracellular, plasma membrane, vacuole	33.33	24.73
TraesCS3B01G121800.1	Wheat	extracellular, plasma membrane, vacuole	33.33	24.64
TraesCS6B01G357400.1	Wheat	extracellular, plasma membrane, vacuole	32.84	24.54
TraesCS2A01G509000.1	Wheat	endoplasmic reticulum, extracellular	32.84	24.45
TraesCS1B01G475500.1	Wheat	extracellular, plasma membrane, vacuole	32.84	24.36
TraesCS4D01G161300.1	Wheat	plasma membrane	32.84	24.28
HORVU7Hr1G067010.1	Barley	extracellular, plasma membrane, vacuole	32.84	24.28
TraesCS3D01G197300.1	Wheat	extracellular	32.35	24.0
TraesCS5D01G003300.1	Wheat	extracellular, plasma membrane, vacuole	32.35	24.0
TraesCS1B01G352800.1	Wheat	extracellular	32.35	24.0
HORVU6Hr1G037070.1	Barley	extracellular, plasma membrane, vacuole	32.35	24.0
TraesCS7B01G047700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	30.88	23.86
TraesCS3A01G218900.3	Wheat	extracellular	31.37	23.44
TraesCS4D01G146500.1	Wheat	endoplasmic reticulum	31.37	23.36
TraesCS3D01G103300.1	Wheat	endoplasmic reticulum, vacuole	32.84	22.79
TraesCS1A01G145400.1	Wheat	plasma membrane, vacuole	30.39	22.71
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	30.88	18.92
BAC19894	Rice	endoplasmic reticulum, plasma membrane	35.29	16.51
PGSC0003DMT400087800	Potato	cytosol, mitochondrion, plastid, vacuole	32.35	16.42
Solyc11g039360.1.1	Tomato	vacuole	18.14	10.76

Protein Annotations

EnsemblPlants:CDY45515	EnsemblPlantsGene:GSBRNA2T00082195001	GO:A0A078FXW6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR36010	ProteinID:CDY17587.1	ProteinID:CDY45515	ProteinID:CDY45515.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE8B49	UniProt:A0A078FXW6	MapMan:35.1	:	:	:

Description

BnaCnng12740DBnaC01g27110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXW6]

Coordinates

chrLK032627:+:111925..113379

Molecular Weight (calculated)

22588.5 Da

IEP (calculated)

10.758

GRAVY (calculated)

-0.034

Length

204 amino acids

Sequence
(BLAST)

001: MRGILRWWPS GGQQKTRRVR SETNSLVSFM YLLAAFAANS QAGETLSPGS GIDWFRADSG SCCLDYPGGN SLMVEHSLAK AKRLLFFREA KLERIEQMVQ
101: LHNFFFFILF MVVPCGTAAP VLLKWFVSRD VPTGAPFSNG TIIPIPISSF PLLVYLHSRK IIRSMDGAKS GVLHAIGQRS VSGRGEGKAK HFGRTGMSND
201: EMTR

Best Arabidopsis Sequence Match ( AT2G07815.1 )
(BLAST)

001: MVSECLFRNR RLFGLFVKAQ RNSKHCSCSE EVQFQRWLGS KEVAEPRTKA RNAFSPMNEE MTRRIRSETN SLVSFMYLLA AFAANSQAGE TLSPGSGIDW
101: FRADSGSCCL DYRRIRGAVL GKEMTQLQKK KDRCRLPTRA RSSIGGQEPW SGGKTEVRLL FFREAKLERI EQMVQLHNFF FFIIFMVVPC GTAAPVLLKW
201: FVSRDVPTGA PFSNGTIIPI PISSFPLLVY LHSRKIIRSM DGAKSGVLHA IGQRSVSGRG EGKAKHFGRT GMSNDEMTR

Arabidopsis Description

BEST Arabidopsis thaliana protein match is: cytochrome C biogenesis 452 (TAIR:ATMG00180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryo /.../2996 (source: NCBI BLink). [Source:TAIR;Acc:AT2G07815]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.