Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| BAC19894 | Rice | endoplasmic reticulum, plasma membrane | 78.98 | 81.88 |
| TraesCS6B01G232500.1 | Wheat | extracellular | 34.07 | 77.39 |
| TraesCS6B01G131800.1 | Wheat | endoplasmic reticulum, extracellular | 34.73 | 74.76 |
| TraesCSU01G050200.1 | Wheat | endoplasmic reticulum, extracellular | 34.51 | 74.64 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, vacuole | 54.87 | 74.47 |
| TraesCS1B01G188800.1 | Wheat | extracellular, plasma membrane, vacuole | 45.13 | 74.18 |
| TraesCS1D01G128300.1 | Wheat | extracellular, plasma membrane, vacuole | 45.13 | 74.18 |
| HORVU7Hr1G067010.1 | Barley | extracellular, plasma membrane, vacuole | 45.13 | 73.91 |
| TraesCS3B01G121800.1 | Wheat | extracellular, plasma membrane, vacuole | 45.13 | 73.91 |
| TraesCS1B01G352800.1 | Wheat | extracellular | 44.91 | 73.82 |
| TraesCS2A01G330700.1 | Wheat | extracellular | 44.69 | 73.72 |
| TraesCS6D01G324000.1 | Wheat | endoplasmic reticulum, extracellular | 34.07 | 73.68 |
| TraesCS7B01G429400.1 | Wheat | extracellular | 34.07 | 73.68 |
| TraesCS3B01G121300.1 | Wheat | endoplasmic reticulum | 35.84 | 73.64 |
| TraesCS1B01G475500.1 | Wheat | extracellular, plasma membrane, vacuole | 44.69 | 73.45 |
| TraesCS2A01G509000.1 | Wheat | endoplasmic reticulum, extracellular | 44.47 | 73.36 |
| TraesCS3D01G197300.1 | Wheat | extracellular | 44.47 | 73.09 |
| HORVU1Hr1G025070.1 | Barley | extracellular | 35.4 | 73.06 |
| TraesCS6B01G131500.1 | Wheat | endoplasmic reticulum, extracellular | 35.4 | 72.73 |
| TraesCS4D01G161300.1 | Wheat | plasma membrane | 44.25 | 72.46 |
| TraesCS5D01G003300.1 | Wheat | extracellular, plasma membrane, vacuole | 44.03 | 72.36 |
| TraesCS7B01G047700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.26 | 72.35 |
| TraesCS4D01G146500.1 | Wheat | endoplasmic reticulum | 43.81 | 72.26 |
| TraesCS6B01G357400.1 | Wheat | extracellular, plasma membrane, vacuole | 43.36 | 71.79 |
| HORVU0Hr1G010690.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 34.51 | 71.56 |
| TraesCS1B01G065500.1 | Wheat | extracellular | 32.74 | 71.5 |
| TraesCS3D01G103300.1 | Wheat | endoplasmic reticulum, vacuole | 46.24 | 71.09 |
| TraesCS3A01G218900.3 | Wheat | extracellular | 42.92 | 71.06 |
| HORVU6Hr1G037070.1 | Barley | extracellular, plasma membrane, vacuole | 43.14 | 70.91 |
| TraesCS1A01G145400.1 | Wheat | plasma membrane, vacuole | 40.27 | 66.67 |
| AT2G07815.1 | Thale cress | mitochondrion | 18.14 | 29.39 |
Protein Annotations
| MapMan:2.4.4.2.3.1 | EntrezGene:814574 | ProteinID:AEK01248.1 | ProteinID:AEK01287.1 | ProteinID:AEK01316.1 | ArrayExpress:ATMG00180 |
| EnsemblPlantsGene:ATMG00180 | RefSeq:ATMG00180 | TAIR:ATMG00180 | RefSeq:ATMG00180-TAIR-G | EnsemblPlants:ATMG00180.1 | TAIR:ATMG00180.1 |
| Symbol:CCB452 | InterPro:CcmF_C | ProteinID:DAB41508.1 | UniProt:G1C2X7 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005743 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0017004 | RefSeq:NP_085489.1 | PFAM:PF16327 | PANTHER:PTHR36010 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000009E64E | SEG:seg | : | : | : | : |
Description
CCB452CcmFC [Source:UniProtKB/TrEMBL;Acc:G1C2X7]
Coordinates
chrMt:-:51293..53611
Molecular Weight (calculated)
51584.6 Da
IEP (calculated)
10.514
GRAVY (calculated)
-0.040
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQLHNFFFF IIFMVVPCGT AAPVLLKWFV SRDVPTGAPF SNGTIIPIPI SSFPLLVYLH SRKIIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK
101: ALFFFVPVLH FRLLESKGDF SYLESFCGVL CLLFFRTFLF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE
201: LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGYELHMG KERCCLRGLD HLHGPTFHSI
301: CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA SIGTGSSRTG
401: GWYTTIMKLP FIFFIRIGFM LASLGGSPSL LRQLQKDKLR WNRESSVEFI IA
101: ALFFFVPVLH FRLLESKGDF SYLESFCGVL CLLFFRTFLF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE
201: LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGYELHMG KERCCLRGLD HLHGPTFHSI
301: CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA SIGTGSSRTG
401: GWYTTIMKLP FIFFIRIGFM LASLGGSPSL LRQLQKDKLR WNRESSVEFI IA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.