Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g060310.2.1 | Tomato | golgi | 39.74 | 5.79 |
| Solyc11g012850.1.1 | Tomato | plastid | 39.74 | 5.79 |
| Solyc04g039870.1.1 | Tomato | cytosol, peroxisome, plastid | 8.97 | 5.22 |
| Solyc11g066440.1.1 | Tomato | plastid | 32.05 | 4.66 |
| Solyc12g096550.1.1 | Tomato | plastid | 24.36 | 3.48 |
| Solyc04g040160.2.1 | Tomato | plastid | 23.08 | 3.31 |
Protein Annotations
| EnsemblPlants:Solyc04g024920.1.1 | EnsemblPlantsGene:Solyc04g024920.1 | PANTHER:PTHR21266 | PANTHER:PTHR21266:SF19 | UniParc:UPI0002765817 | UniProt:K4BQT9 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:27467557..27467793
Molecular Weight (calculated)
8882.1 Da
IEP (calculated)
8.324
GRAVY (calculated)
0.421
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MKCFQVVHCV VDEGLRTYNL PFIFISALKF LTPASGFQGY WDLYPIDMKF IPPCMILSTI VISKPDKFSG QSIKQCLT
001: MILHDKVVDV LNPLAREYKS IGTVKKELAG LQEELSKAHQ QVHISEARVS TALDKLAHME ELVNDRLLPG RVVTELDKPS SSTTASAVEL DREKTNTGAK
101: SLNVSGPVPP YSPHLKNFWY PVAFTADLKH DTMVPIECFE QPWVIFRGED GKPGCVRNTC AHRACPLDLG TVNEGRIQCP YHGWEYSTDG ECKKMPSTKL
201: LKVKIKSLPC LEQEGMIWIW PGDEPPAPIL PSLQPPSGFL IHAELVMDLP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PSLVKFLTPT SGLQGYWDPY
301: PIDMEFKPPC IVLSTIGISK PGKLEGKSTQ QCATHLHQLH VCLPSSKNKT RLLYRMSLDF APILKNLPFM EHLWRHFAEQ VLNEDLRLVL GQQERMLNGA
401: NIWNLPVAYD KLGVRYRLWR NAVDRGDDKL PFSG
101: SLNVSGPVPP YSPHLKNFWY PVAFTADLKH DTMVPIECFE QPWVIFRGED GKPGCVRNTC AHRACPLDLG TVNEGRIQCP YHGWEYSTDG ECKKMPSTKL
201: LKVKIKSLPC LEQEGMIWIW PGDEPPAPIL PSLQPPSGFL IHAELVMDLP VEHGLLLDNL LDLAHAPFTH TSTFAKGWSV PSLVKFLTPT SGLQGYWDPY
301: PIDMEFKPPC IVLSTIGISK PGKLEGKSTQ QCATHLHQLH VCLPSSKNKT RLLYRMSLDF APILKNLPFM EHLWRHFAEQ VLNEDLRLVL GQQERMLNGA
401: NIWNLPVAYD KLGVRYRLWR NAVDRGDDKL PFSG
Arabidopsis Description
CAOCH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6L1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.