Factsheet for Solyc07g017950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010489	Potato	plastid	94.08	94.08
VIT_11s0052g00820.t01	Wine grape	plastid	71.01	71.01
KRH19034	Soybean	plastid	68.64	67.44
GSMUA_Achr7P15900_001	Banana	plastid	60.35	58.29
Solyc02g085950.2.1	Tomato	extracellular	52.07	48.89
Solyc03g034220.2.1	Tomato	plastid	52.07	48.89
Solyc02g063150.2.1	Tomato	nucleus, plastid	50.89	47.51
Os02t0152400-01	Rice	plastid	50.3	46.45

Protein Annotations

KEGG:00630+4.1.1.39	KEGG:00710+4.1.1.39	MapMan:1.2.1.1.2	Gene3D:3.30.190.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0009853	GO:GO:0009987	GO:GO:0015977	GO:GO:0015979
GO:GO:0016491	GO:GO:0016829	GO:GO:0016984	GO:GO:0055114	InterPro:IPR036385	UniProt:K4CCK9
PFAM:PF00101	PRINTS:PR00152	PANTHER:PTHR31262	PANTHER:PTHR31262:SF7	InterPro:RuBisCO_sc	InterPro:RuBisCO_sc_dom
InterPro:RuBisCO_ssu_sf	SMART:SM00961	SUPFAM:SSF55239	EnsemblPlantsGene:Solyc07g017950.2	EnsemblPlants:Solyc07g017950.2.1	UniParc:UPI000276C1C7

Description

Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:K4CCK9]

Coordinates

chr7:+:8636547..8638555

Molecular Weight (calculated)

19383.3 Da

IEP (calculated)

8.963

GRAVY (calculated)

-0.378

Length

169 amino acids

Sequence
(BLAST)

001: MSVSSFVAPI VGSTYLGLKS NRSNFFPAVK DTITWSRKTI SNGSKTYCMK SWNPIDNKKF ETLSYLPPQS EESIAKEVDY IIKKGWVPCL EFDQVGYVHR
101: ENSKMPGYYD GRYWTLWKLP MFGCNDSSQV LNEIQECKKA YPNAFIRCLA FDNVKQAQCM AFLIQKPAP

Best Arabidopsis Sequence Match ( AT1G67090.1 )
(BLAST)

001: MASSMLSSAT MVASPAQATM VAPFNGLKSS AAFPATRKAN NDITSITSNG GRVNCMQVWP PIGKKKFETL SYLPDLTDSE LAKEVDYLIR NKWIPCVEFE
101: LEHGFVYREH GNSPGYYDGR YWTMWKLPLF GCTDSAQVLK EVEECKKEYP NAFIRIIGFD NTRQVQCISF IAYKPPSFTG

Arabidopsis Description

RBCS-1ARibulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:A0A178WD57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.