Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G232900.1 | Wheat | nucleus | 58.71 | 95.68 |
| TraesCS1B01G246000.1 | Wheat | nucleus | 95.83 | 95.47 |
| TraesCS3D01G531200.1 | Wheat | nucleus | 83.33 | 82.4 |
| TraesCS3D01G529800.1 | Wheat | cytosol | 82.2 | 81.27 |
| HORVU1Hr1G058340.3 | Barley | nucleus | 80.3 | 79.7 |
| Os08t0430100-01 | Rice | mitochondrion | 75.38 | 74.25 |
| Zm00001d052473_P001 | Maize | nucleus | 67.8 | 65.81 |
| EES09236 | Sorghum | nucleus | 66.67 | 65.19 |
| Zm00001d004959_P003 | Maize | cytosol | 68.94 | 63.19 |
| PGSC0003DMT400037712 | Potato | nucleus | 37.88 | 38.17 |
| Solyc05g009290.2.1 | Tomato | nucleus | 36.74 | 37.89 |
| GSMUA_Achr8P23090_001 | Banana | cytosol | 45.45 | 34.99 |
| VIT_01s0011g03510.t01 | Wine grape | extracellular, plastid | 39.77 | 33.44 |
| TraesCS5D01G118100.2 | Wheat | nucleus | 29.92 | 24.31 |
| TraesCS2D01G231800.1 | Wheat | mitochondrion | 29.55 | 22.54 |
| TraesCS5D01G486000.1 | Wheat | mitochondrion | 23.11 | 18.1 |
| TraesCS6D01G159700.1 | Wheat | nucleus | 26.14 | 14.78 |
| TraesCS6D01G330600.1 | Wheat | mitochondrion | 23.48 | 14.0 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G234100.2 | EnsemblPlantsGene:TraesCS1D01G234100 | ncoils:Coil | PANTHER:PTHR33405 | PANTHER:PTHR33405:SF14 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:322285449..322286460
Molecular Weight (calculated)
30394.1 Da
IEP (calculated)
9.399
GRAVY (calculated)
-1.041
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKHRISRQ YYEEPRGFCD GPPRLARERS ISPRRFEGEL SSRRDEIRRI RDDNQHLVDE IVGLRQAMSH LKEDLYSSSQ AIPKLRAEKE LESRELTQRN
101: LKLEAELRSL EPHRQHALQL RSEAGTLQSL RQELTEKVQG LTKEVEHQNS EKQRIPAMVA KRDGLRQELI RTRAALDYEK NAKAELMAQV QAVEKDLVTM
201: AQESEKLRAE IEKRRPPGFS GHGAYGPPMT TPGMGLQDIY DSGYSYREKR YGAGPWDPPG YPHP
101: LKLEAELRSL EPHRQHALQL RSEAGTLQSL RQELTEKVQG LTKEVEHQNS EKQRIPAMVA KRDGLRQELI RTRAALDYEK NAKAELMAQV QAVEKDLVTM
201: AQESEKLRAE IEKRRPPGFS GHGAYGPPMT TPGMGLQDIY DSGYSYREKR YGAGPWDPPG YPHP
001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
Arabidopsis Description
FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.