Factsheet for Zm00001d052473_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004959_P003	Maize	cytosol	88.6	83.68
Os08t0430100-01	Rice	mitochondrion	73.9	75.0
TraesCS1A01G232900.1	Wheat	nucleus	42.28	70.99
TraesCS3D01G529800.1	Wheat	cytosol	68.38	69.66
TraesCS3A01G524600.1	Wheat	nucleus	67.65	68.91
TraesCS3B01G591900.1	Wheat	nucleus	67.28	68.54
TraesCS1B01G246000.1	Wheat	nucleus	66.54	68.3
TraesCS3D01G531200.1	Wheat	nucleus	66.91	68.16
TraesCS1D01G234100.2	Wheat	nucleus	65.81	67.8
TraesCS1B01G180300.1	Wheat	nucleus	65.81	67.55
TraesCS3A01G526000.1	Wheat	nucleus	65.81	67.04
TraesCS3B01G593200.1	Wheat	nucleus	65.81	67.04
HORVU3Hr1G114170.1	Barley	cytosol	65.07	66.29
HORVU1Hr1G058340.3	Barley	nucleus	58.82	60.15
PGSC0003DMT400037712	Potato	nucleus	37.87	39.31
Solyc05g009290.2.1	Tomato	nucleus	36.03	38.28
GSMUA_Achr8P23090_001	Banana	cytosol	44.85	35.57
VIT_01s0011g03510.t01	Wine grape	extracellular, plastid	40.44	35.03
Zm00001d021587_P002	Maize	mitochondrion	33.46	25.78
Zm00001d012984_P002	Maize	mitochondrion	29.04	24.46
Zm00001d034618_P003	Maize	extracellular, mitochondrion	28.31	24.21
Zm00001d044699_P002	Maize	nucleus	29.78	23.14
Zm00001d025689_P002	Maize	cytosol	25.37	14.4
Zm00001d003291_P002	Maize	mitochondrion, plastid	23.9	12.67

Protein Annotations

EMBL:BT035300	EMBL:BT060561	EnsemblPlants:Zm00001d052473_P001	EnsemblPlants:Zm00001d052473_T001	EnsemblPlantsGene:Zm00001d052473	EntrezGene:100193124
ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF14	ProteinID:AQK57306.1	ProteinID:AQK57307.1	ProteinID:AQK57309.1
SEG:seg	UniParc:UPI00017B6601	UniProt:B4FDW2	MapMan:35.1	:	:

Description

Protein FLX-like 3

Coordinates

chr4:-:190787804..190793183

Molecular Weight (calculated)

30622.5 Da

IEP (calculated)

9.979

GRAVY (calculated)

-0.886

Length

272 amino acids

Sequence
(BLAST)

001: MAGRHRAPRQ YHDEPRGYRD GPPPPLPRPR PLSPRRMAEE LSRRRAEIRR IHEDNQRLAD EIVSLKQTMP RLQEDLRISS QAVPKLRAEK ELESRELTQR
101: NLKLEAELRA LEPLRQDALH LRSEASKLQS LRQELAAKVQ GLSKELELQK SESQKMTALV AERDALCQEL LQARANLEFE KKAKPELTAQ VQAMEKDLVA
201: MAQEAEKLRA DIAKRNTPTS FSSRGTYGAS LSTPGMGLQG MYDGGGYSMA GSRYGSGTGA WSSHDPHGYP HL

Best Arabidopsis Sequence Match ( AT1G55170.1 )
(BLAST)

001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH

Arabidopsis Description

FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.