Factsheet for Zm00001d044699_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78707	Sorghum	nucleus	81.43	81.66
KXG23194	Sorghum	nucleus	80.29	80.29
Os12t0193100-03	Rice	nucleus	55.43	61.98
TraesCS5B01G113500.2	Wheat	nucleus	56.29	60.62
TraesCS5A01G121400.1	Wheat	nucleus	56.0	60.31
TraesCS5D01G118100.2	Wheat	nucleus	55.71	60.0
GSMUA_Achr8P21750_001	Banana	nucleus	36.0	45.0
KRH10004	Soybean	mitochondrion	33.14	40.14
GSMUA_Achr10P...	Banana	cytosol	34.86	39.87
PGSC0003DMT400006407	Potato	mitochondrion, nucleus	31.14	39.21
Solyc03g121500.2.1	Tomato	cytosol, nucleus	27.71	38.8
CDY24052	Canola	nucleus	29.14	37.5
Bra037981.1-P	Field mustard	nucleus	28.86	37.13
CDY33066	Canola	nucleus	28.86	37.13
KRH23325	Soybean	nucleus	33.43	35.56
AT1G55170.1	Thale cress	nucleus	27.71	34.28
VIT_09s0002g02070.t01	Wine grape	mitochondrion	34.57	33.24
Zm00001d052473_P001	Maize	nucleus	23.14	29.78
Zm00001d004959_P003	Maize	cytosol	22.86	27.78
CDY08227	Canola	nucleus	24.0	25.61
Bra014359.1-P	Field mustard	nucleus	23.43	25.0
Zm00001d012984_P002	Maize	mitochondrion	22.0	23.84
Zm00001d034618_P003	Maize	extracellular, mitochondrion	21.43	23.58
Zm00001d021587_P002	Maize	mitochondrion	23.71	23.51
Zm00001d025689_P002	Maize	cytosol	20.57	15.03
Zm00001d003291_P002	Maize	mitochondrion, plastid	19.14	13.06

Protein Annotations

EMBL:BT043356	EMBL:BT055127	EMBL:EU960374	EnsemblPlants:Zm00001d044699_P002	EnsemblPlants:Zm00001d044699_T002	EnsemblPlantsGene:Zm00001d044699
EntrezGene:100283029	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF14	ProteinID:ONM42292.1	ProteinID:ONM42293.1
SEG:seg	UniParc:UPI00017B7B54	UniProt:B4G1W8	MapMan:35.1	:	:

Description

Protein FLX-like 3

Coordinates

chr3:-:235217970..235223164

Molecular Weight (calculated)

39949.3 Da

IEP (calculated)

6.161

GRAVY (calculated)

-0.828

Length

350 amino acids

Sequence
(BLAST)

001: MSERGRLAGR LIDNRSRGYH VVPLVEDPRG HPEVLVDGDR RGYSDIRGVQ QRRGYPDTHL LEEPRGYPGV RVVDHRGYPG SRGVDERRAY PELHQGSRMR
101: AAPPPYPAAF EDELELQEVE LRRLSAHNRA LVEERELLSR EIQAGKDEVR HLNVIIADIN TEKEAYISKL MDKRRKLEAE LGASEHLCDE VRHLRGEIDK
201: LVTARKELSA EAASLVEELN REQSVKQQLP VLKTEIDGLQ QELVHVRTAC GLEQKGNLEL LEQRKAMEKN MLSMAQEIEQ MRGELANFEV RPRGPGGAYG
301: MQIGSSEVTF TKNPYEDGYN AYVGVPEKDP LHPPEYASWG TYDRSRLQYR

Best Arabidopsis Sequence Match ( AT1G55170.1 )
(BLAST)

001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH

Arabidopsis Description

FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.