Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08227 | Canola | nucleus | 97.26 | 97.26 |
| Bra037981.1-P | Field mustard | nucleus | 53.96 | 65.07 |
| AT1G55170.1 | Thale cress | nucleus | 52.74 | 61.13 |
| Solyc03g121500.2.1 | Tomato | cytosol, nucleus | 36.28 | 47.6 |
| PGSC0003DMT400006407 | Potato | mitochondrion, nucleus | 37.5 | 44.24 |
| KRH10004 | Soybean | mitochondrion | 36.28 | 41.18 |
| GSMUA_Achr8P21750_001 | Banana | nucleus | 33.23 | 38.93 |
| KRH23325 | Soybean | nucleus | 36.28 | 36.17 |
| VIT_09s0002g02070.t01 | Wine grape | mitochondrion | 39.63 | 35.71 |
| GSMUA_Achr10P... | Banana | cytosol | 32.01 | 34.31 |
| Os12t0193100-03 | Rice | nucleus | 28.35 | 29.71 |
| TraesCS5D01G118100.2 | Wheat | nucleus | 27.44 | 27.69 |
| TraesCS5B01G113500.2 | Wheat | nucleus | 27.44 | 27.69 |
| TraesCS5A01G121400.1 | Wheat | nucleus | 27.44 | 27.69 |
| Bra010043.1-P | Field mustard | nucleus, peroxisome, plasma membrane, plastid | 15.55 | 24.4 |
| Bra027313.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 24.39 | 24.24 |
| Bra027315.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 24.39 | 24.1 |
| OQU78707 | Sorghum | nucleus | 25.3 | 23.78 |
| Zm00001d044699_P002 | Maize | nucleus | 25.0 | 23.43 |
| KXG23194 | Sorghum | nucleus | 24.39 | 22.86 |
| Bra034018.1-P | Field mustard | nucleus | 19.21 | 20.59 |
| Bra004207.1-P | Field mustard | nucleus | 20.12 | 19.19 |
| Bra018336.1-P | Field mustard | nucleus | 15.85 | 18.7 |
Protein Annotations
Description
AT1G55170 (E=3e-084) | unknown protein
Coordinates
chrA08:+:1412965..1414997
Molecular Weight (calculated)
36724.4 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.621
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSYHDPRG FSPERLLEDL HIQTLEIQRL FNDNHRLAEH RVLLERELAS AKEELHRMNL IICDLRAQHD LQSREFGEIR EADARATESD KEEAALLRGE
101: VQKLNDIKRE LSGDVEILRK DLLKLQSDNK QIPGLRAEVQ DLKKELMHAR GAIDYEKKEK FELMEQWQAM EHNMVSMARD VERLRAQLAA VDSRPWGYGG
201: SYEMNFNNMN GSFRGSYGEH DSFLMSSERR VNLLSQPRNT GNQTASNRIE AAGTLECTRS VGQPQDGANG QTHVAVGDTA AVSAAVLHGL KELFGPLLQQ
301: SSAGGLASRA TAVLQVQGCA AHVESKKL
101: VQKLNDIKRE LSGDVEILRK DLLKLQSDNK QIPGLRAEVQ DLKKELMHAR GAIDYEKKEK FELMEQWQAM EHNMVSMARD VERLRAQLAA VDSRPWGYGG
201: SYEMNFNNMN GSFRGSYGEH DSFLMSSERR VNLLSQPRNT GNQTASNRIE AAGTLECTRS VGQPQDGANG QTHVAVGDTA AVSAAVLHGL KELFGPLLQQ
301: SSAGGLASRA TAVLQVQGCA AHVESKKL
001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
Arabidopsis Description
FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.