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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10713 Canola mitochondrion 99.64 99.64
CDY51010 Canola nucleus 97.84 97.84
AT2G30120.5 Thale cress plastid 76.26 72.11
GSMUA_Achr10P... Banana mitochondrion 38.49 35.67
KRG92122 Soybean plastid 17.63 35.25
KRH17098 Soybean plastid 35.97 35.21
KRH72743 Soybean mitochondrion 37.41 35.14
VIT_06s0004g07170.t01 Wine grape mitochondrion 38.85 34.39
Zm00001d034618_P003 Maize extracellular, mitochondrion 33.45 29.25
EER93206 Sorghum mitochondrion 33.45 28.79
Zm00001d012984_P002 Maize mitochondrion 33.45 28.79
Solyc09g055700.2.1 Tomato nucleus 32.01 28.16
TraesCS5B01G486200.1 Wheat cytosol, mitochondrion, nucleus 33.09 27.3
TraesCS5A01G473300.1 Wheat cytosol, mitochondrion, nucleus 33.09 27.14
Bra010043.1-P Field mustard nucleus, peroxisome, plasma membrane, plastid 20.14 26.79
TraesCS5D01G486000.1 Wheat mitochondrion 32.37 26.71
HORVU5Hr1G112380.1 Barley cytosol 32.73 25.42
Os03t0818000-00 Rice mitochondrion 33.09 24.66
Bra037981.1-P Field mustard nucleus 23.38 23.9
Bra027313.1-P Field mustard cytosol, mitochondrion, nucleus, peroxisome 26.98 22.73
Bra027315.1-P Field mustard cytosol, mitochondrion, nucleus, peroxisome 26.98 22.59
Bra034018.1-P Field mustard nucleus 20.86 18.95
Bra004207.1-P Field mustard nucleus 21.58 17.44
Bra014359.1-P Field mustard nucleus 18.7 15.85
Protein Annotations
EnsemblPlants:Bra018336.1EnsemblPlants:Bra018336.1-PEnsemblPlantsGene:Bra018336ncoils:CoilPANTHER:PTHR33405PANTHER:PTHR33405:SF6
SEG:segUniParc:UPI0002547BAFUniProt:M4DP95MapMan:35.1::
Description
AT2G30120 (E=4e-085) | unknown protein
Coordinates
chrA05:+:7550701..7552013
Molecular Weight (calculated)
30525.8 Da
IEP (calculated)
5.860
GRAVY (calculated)
-0.691
Length
278 amino acids
Sequence
(BLAST)
001: MAGRDRYLPS SSSLRVSESQ LTESDMNRTR SALLEEKIAA QHREIQSILT DNQKLALAHL GVKDQLNLAK RELARLLEAA AAVKSDTEAK VREVYQNSLR
101: MEAEARVVNG IGAELDQVRS DVQRLAEDRQ KLTAELAMLN GEIAKAKPNS DRAVEVKAEI ESLREEVSKG RAALDLEKKT RAGNLHHERG MEKTIDHLNR
201: EIVKLEEELA DLETKAKAAA EAAQTPSPGL VASYGNSDDI YGSQGHQYPE ANGSHQVHGS LDCLPQQPAN NTQHSSVP
Best Arabidopsis Sequence Match ( AT2G30120.5 )
(BLAST)
001: MAGRDRYIPS SAVSTSSSSR LLESQLIESD RNRARSVILE DRIAIQHREI QSLLNDNQRL AVAHIGLKDQ LNVAKRELER LLETAVKVKA EGEAKVREVY
101: QNALRMEAEA RVIDGLGAEL GQVRSDVQRL GSDRQELATE LAMFDDEMAK AKPNSDRAIE VKLEIEILRG EIRKGRAALE LEKKTRASNL HHERGMEKTI
201: DHLNREIVKL EEELVDLETK AREANAAAEA APTPSPGLAA SYGNNTDDIY GGQGRQYPEA NGTHEAYRAS DCLSQDPSTP LQHPLNNTQH SSVL
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 ( /.../: NCBI BLink). [Source:TAIR;Acc:AT2G30120]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.