CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17098	Soybean	plastid	86.49	90.14
KRG92122	Soybean	plastid	33.45	71.22
VIT_06s0004g07170.t01	Wine grape	mitochondrion	50.34	47.45
GSMUA_Achr10P...	Banana	mitochondrion	43.58	43.0
CDY10713	Canola	mitochondrion	35.47	37.77
Bra018336.1-P	Field mustard	nucleus	35.14	37.41
CDY51010	Canola	nucleus	35.14	37.41
Zm00001d034618_P003	Maize	extracellular, mitochondrion	39.86	37.11
EER93206	Sorghum	mitochondrion	40.2	36.84
Solyc09g055700.2.1	Tomato	nucleus	39.19	36.71
Zm00001d012984_P002	Maize	mitochondrion	39.86	36.53
AT2G30120.5	Thale cress	plastid	35.81	36.05
KRH43428	Soybean	endoplasmic reticulum	39.53	35.56
TraesCS5D01G486000.1	Wheat	mitochondrion	40.2	35.31
KRH13877	Soybean	nucleus	38.51	35.19
TraesCS5B01G486200.1	Wheat	cytosol, mitochondrion, nucleus	39.86	35.01
TraesCS5A01G473300.1	Wheat	cytosol, mitochondrion, nucleus	39.86	34.81
HORVU5Hr1G112380.1	Barley	cytosol	40.54	33.52
Os03t0818000-00	Rice	mitochondrion	40.88	32.44
KRH10004	Soybean	mitochondrion	27.36	28.03
KRH23325	Soybean	nucleus	27.36	24.62
KRH18932	Soybean	mitochondrion	22.97	24.37
KRH01477	Soybean	nucleus	25.34	18.56

Protein Annotations

EMBL:ACUP02001237	EnsemblPlants:KRH72743	EnsemblPlantsGene:GLYMA_02G230700	EntrezGene:100814093	ncoils:Coil	PANTHER:PTHR33405
PANTHER:PTHR33405:SF6	ProteinID:KRH72743	ProteinID:KRH72743.1	SEG:seg	UniParc:UPI00023BC616	UniProt:I1JHG9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:41822467..41826299

Molecular Weight (calculated)

32986.7 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.619

Length

296 amino acids

Sequence
(BLAST)

001: MAGRKHAPSS FTRLDETRLA HSSSSAAVVR ALEERVEVCH REIQALLSDN QRLAGIHVAL KQDLAATQEE LRRLSAAAAE IKAERDAEVR EIYEKSLKVD
101: AEVRAVAAIS AELDRVRTDV QELAAERNEL AAQLHAVESE LAKARAEALF VPAIKADIET MRHEIQRGRN AIEFEKKTHA SNLEHRRTMD NNMIIMDHEV
201: EKLRAELANE EKRARAAMAA DTKPSPGYPA NYDNPEMGYG GTTCPPDSYS THQMQAVVDT HSPHEAGAPL HHPNDLQHTQ VPRNLFNNRA YSFADI

Best Arabidopsis Sequence Match ( AT2G30120.5 )
(BLAST)

001: MAGRDRYIPS SAVSTSSSSR LLESQLIESD RNRARSVILE DRIAIQHREI QSLLNDNQRL AVAHIGLKDQ LNVAKRELER LLETAVKVKA EGEAKVREVY
101: QNALRMEAEA RVIDGLGAEL GQVRSDVQRL GSDRQELATE LAMFDDEMAK AKPNSDRAIE VKLEIEILRG EIRKGRAALE LEKKTRASNL HHERGMEKTI
201: DHLNREIVKL EEELVDLETK AREANAAAEA APTPSPGLAA SYGNNTDDIY GGQGRQYPEA NGTHEAYRAS DCLSQDPSTP LQHPLNNTQH SSVL

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 ( /.../: NCBI BLink). [Source:TAIR;Acc:AT2G30120]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.