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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G473300.1 Wheat cytosol, mitochondrion, nucleus 86.03 90.86
TraesCS5D01G486000.1 Wheat mitochondrion 84.92 90.21
TraesCS5B01G486200.1 Wheat cytosol, mitochondrion, nucleus 84.92 90.21
EER93206 Sorghum mitochondrion 61.73 68.42
Zm00001d034618_P003 Maize extracellular, mitochondrion 60.06 67.61
Zm00001d012984_P002 Maize mitochondrion 59.78 66.25
Os03t0818000-00 Rice mitochondrion 62.85 60.32
KRH17098 Soybean plastid 32.96 41.55
KRH72743 Soybean mitochondrion 33.52 40.54
GSMUA_Achr10P... Banana mitochondrion 33.52 40.0
VIT_06s0004g07170.t01 Wine grape mitochondrion 33.24 37.9
KRG92122 Soybean plastid 13.69 35.25
CDY10713 Canola mitochondrion 25.42 32.73
Bra018336.1-P Field mustard nucleus 25.42 32.73
AT2G30120.5 Thale cress plastid 26.82 32.65
CDY51010 Canola nucleus 25.14 32.37
Solyc09g055700.2.1 Tomato nucleus 28.49 32.28
HORVU2Hr1G047850.4 Barley mitochondrion 28.77 27.69
HORVU3Hr1G114170.1 Barley cytosol 17.88 23.97
HORVU1Hr1G058340.3 Barley nucleus 16.48 22.18
HORVU6Hr1G034720.1 Barley nucleus 19.55 15.38
Protein Annotations
EnsemblPlants:HORVU5Hr1G112380.1EnsemblPlantsGene:HORVU5Hr1G112380ncoils:CoilPANTHER:PTHR33405PANTHER:PTHR33405:SF6SEG:seg
UniParc:UPI000B46CD8BUniProt:A0A287SRG6MapMan:35.1:::
Description
No Description!
Coordinates
chrchr5H:-:638976527..638981657
Molecular Weight (calculated)
38891.6 Da
IEP (calculated)
7.556
GRAVY (calculated)
-0.619
Length
358 amino acids
Sequence
(BLAST)
001: LIEATGRPIS LTPNPSAAAR LPMAGRRGPH IMNLHDSGPP LLGRAPQHQQ PGDDRGEPPH GALLHLPRGG PAQHPAVAAL EDRIVARDRD IQEFLVDNQR
101: FAATHVALQQ QLISAQHELR AVSIAGTRAR MEREAEVCAI ADQAARIEAE ARSVAGARLE IDQVHADVRV LAGARSELID RLKGIREQLG RAQSESAKLE
201: NVRTQIETMR REIQKGRAAV EFEKKAHADN LQQSKAMEKN MIAVASEIER LRGELVNAEK RATAVTTAAA VTNPGYAQPY GSSEATYAYG NPEAAYGVAY
301: GSAEATYAGT YANSDAYSTS NQAQARTGGN PHYMAQPVHY AQYEGHHQQQ QQHTNVQR
Best Arabidopsis Sequence Match ( AT2G30120.5 )
(BLAST)
001: MAGRDRYIPS SAVSTSSSSR LLESQLIESD RNRARSVILE DRIAIQHREI QSLLNDNQRL AVAHIGLKDQ LNVAKRELER LLETAVKVKA EGEAKVREVY
101: QNALRMEAEA RVIDGLGAEL GQVRSDVQRL GSDRQELATE LAMFDDEMAK AKPNSDRAIE VKLEIEILRG EIRKGRAALE LEKKTRASNL HHERGMEKTI
201: DHLNREIVKL EEELVDLETK AREANAAAEA APTPSPGLAA SYGNNTDDIY GGQGRQYPEA NGTHEAYRAS DCLSQDPSTP LQHPLNNTQH SSVL
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes - 49 ( /.../: NCBI BLink). [Source:TAIR;Acc:AT2G30120]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.