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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034618_P003 Maize extracellular, mitochondrion 58.18 68.24
Zm00001d012984_P002 Maize mitochondrion 58.71 67.8
EER93206 Sorghum mitochondrion 58.71 67.8
TraesCS5A01G473300.1 Wheat cytosol, mitochondrion, nucleus 60.32 66.37
TraesCS5D01G486000.1 Wheat mitochondrion 59.79 66.17
TraesCS5B01G486200.1 Wheat cytosol, mitochondrion, nucleus 59.79 66.17
HORVU5Hr1G112380.1 Barley cytosol 60.32 62.85
GSMUA_Achr10P... Banana mitochondrion 34.85 43.33
KRH17098 Soybean plastid 31.9 41.9
KRH72743 Soybean mitochondrion 32.44 40.88
VIT_06s0004g07170.t01 Wine grape mitochondrion 32.44 38.53
KRG92122 Soybean plastid 13.67 36.69
Bra018336.1-P Field mustard nucleus 24.66 33.09
CDY10713 Canola mitochondrion 24.66 33.09
CDY51010 Canola nucleus 24.13 32.37
AT2G30120.5 Thale cress plastid 25.47 32.31
Solyc09g055700.2.1 Tomato nucleus 26.81 31.65
Os07t0508200-01 Rice cytosol, mitochondrion, nucleus, plastid 28.95 30.34
Os02t0192100-01 Rice mitochondrion 17.69 26.4
Os08t0430100-01 Rice mitochondrion 17.96 25.0
Os12t0193100-03 Rice nucleus 20.64 24.6
Os04t0479100-01 Rice cytosol 21.72 19.95
Protein Annotations
EnsemblPlants:Os03t0818000-00EnsemblPlantsGene:Os03g0818000GO:GO:0005575GO:GO:0016020GO:GO:0016021ncoils:Coil
PANTHER:PTHR33405PANTHER:PTHR33405:SF6ProteinID:BAS87062.1SEG:segTMHMM:TMhelixUniParc:UPI000393AE5B
UniProt:A0A0P0W524MapMan:35.1::::
Description
Similar to myosin-like protein. (Os03t0818000-00)
Coordinates
chr3:+:34327189..34331866
Molecular Weight (calculated)
40585.3 Da
IEP (calculated)
7.094
GRAVY (calculated)
-0.189
Length
373 amino acids
Sequence
(BLAST)
001: MAARRGPHVI KLHDSAPALL GRAPMPPPPG PRDELPPPSA VLVHHPRGGL APHPAVAALE DRLAVRDRDI QELLVDNQRF AATHVALQQQ LIAAQHELRV
101: VSIAATRARA EREDEVRALA EQAARIEAEA RAAVAARAEV DQVHADVQVL AGARTELVDR LQDLRGQLAR FQAEAGKTES VRAQVETMRR EIQKGRAAVE
201: FEKKAHADNL EQSKAMEKNM IAVASEIEKL RGDLANAEKR ATAVTATAPV ANPAPAAYGN SETTYAPTYG NTEAAYASTY GSSEAAYAAA YGNSDAYSTN
301: QVGYIPLSLF SCFISGVKYI FLLSLLCMSK DTHSRTEIHY YLNRCILVSS LNICSSFYFT VGLEMIRCAM YCF
Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)
001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R
Arabidopsis Description
FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.