Factsheet for Os02t0192100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0618200-01
Os03t0411000-01
Os04t0663200-01
Os06t0206100-01
Os11t0140600-01
Os12t0137100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67170.1	Os03t0411000-01	AT3G13990.1	21798944
AT1G67170.1	Os06t0206100-01	AT3G13990.1	21798944
AT1G67170.1	Os04t0663200-01	AT3G51180.1	21798944
AT1G67170.1	Os11t0140600-01	AT5G04170.1	21798944
AT1G67170.1	Os12t0137100-01	AT5G04170.1	21798944
AT1G67170.1	Os02t0618200-01	AT5G61380.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G034720.1	Barley	nucleus	74.4	40.88
GSMUA_Achr1P15680_001	Banana	endoplasmic reticulum, plasma membrane	38.4	40.34
TraesCS6A01G169900.1	Wheat	nucleus	74.4	39.83
TraesCS6B01G198100.1	Wheat	extracellular, mitochondrion, nucleus, plastid	75.2	39.66
TraesCS6D01G159700.1	Wheat	nucleus	73.2	39.19
EES06432	Sorghum	mitochondrion	74.0	37.07
Bra034018.1-P	Field mustard	nucleus	44.8	36.6
CDY12623	Canola	nucleus	45.6	35.96
AT1G67170.1	Thale cress	nucleus	47.2	32.87
GSMUA_Achr1P19060_001	Banana	cytosol, mitochondrion, nucleus, plastid	56.8	32.79
VIT_14s0083g00450.t01	Wine grape	mitochondrion	55.6	32.1
Bra004207.1-P	Field mustard	nucleus	44.0	31.98
CDX96108	Canola	cytosol, mitochondrion, nucleus, plastid	44.0	31.98
CDY01786	Canola	cytosol	44.4	31.9
KRH01477	Soybean	nucleus	46.4	28.71
Solyc02g065630.2.1	Tomato	nucleus	48.0	27.15
PGSC0003DMT400068308	Potato	plastid	48.8	26.99
CDY54119	Canola	mitochondrion	37.6	25.75
Os08t0430100-01	Rice	mitochondrion	26.0	24.25
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	30.0	21.07
Os12t0193100-03	Rice	nucleus	26.0	20.77
Os04t0479100-01	Rice	cytosol	32.0	19.7
Os03t0818000-00	Rice	mitochondrion	26.4	17.69

Protein Annotations

EnsemblPlants:Os02t0192100-01	EnsemblPlantsGene:Os02g0192100	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF5	ProteinID:BAS77413.1
SEG:seg	UniParc:UPI000393B2F1	UniProt:A0A0P0VFT9	MapMan:35.1	:	:

Description

Conserved hypothetical protein. (Os02t0192100-01)

Coordinates

chr2:-:5118284..5121512

Molecular Weight (calculated)

27887.5 Da

IEP (calculated)

7.274

GRAVY (calculated)

-0.620

Length

250 amino acids

Sequence
(BLAST)

001: MGSKGRAPPP YHHRGAHKMM HRDPYGGAPG MPGPFPYDML AAAAPPPEIL EQKLMAQRGE LQKLAVENDR LAMSHDSLRK ELAAAQQEAQ RLQAQGQAAM
101: AAEEQEARGI LDKVAKMEAD LKARDPVKAE LQQAHAEAQG LVVARQQLAA DTQKLSKDLQ RNLGEAQQLP ALVAERDAAR QEYQHLRATY EYERKLRMDH
201: SESLQVMKRN YDTMVAELDK LRAELMNTAN IDRGGMPFIC CSIFFTTIFG

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.