Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12623 | Canola | nucleus | 67.97 | 76.97 |
| Bra004207.1-P | Field mustard | nucleus | 71.87 | 75.0 |
| CDX96108 | Canola | cytosol, mitochondrion, nucleus, plastid | 71.87 | 75.0 |
| Bra034018.1-P | Field mustard | nucleus | 63.23 | 74.18 |
| CDY01786 | Canola | cytosol | 71.31 | 73.56 |
| CDY54119 | Canola | mitochondrion | 56.82 | 55.89 |
| VIT_14s0083g00450.t01 | Wine grape | mitochondrion | 62.12 | 51.5 |
| Os02t0192100-01 | Rice | mitochondrion | 32.87 | 47.2 |
| KRH01477 | Soybean | nucleus | 50.14 | 44.55 |
| GSMUA_Achr1P15680_001 | Banana | endoplasmic reticulum, plasma membrane | 28.13 | 42.44 |
| GSMUA_Achr1P19060_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 49.58 | 41.11 |
| Solyc02g065630.2.1 | Tomato | nucleus | 46.8 | 38.01 |
| PGSC0003DMT400068308 | Potato | plastid | 47.08 | 37.39 |
| HORVU6Hr1G034720.1 | Barley | nucleus | 39.83 | 31.43 |
| TraesCS6B01G198100.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 40.95 | 31.01 |
| TraesCS6D01G159700.1 | Wheat | nucleus | 39.83 | 30.62 |
| TraesCS6A01G169900.1 | Wheat | nucleus | 39.55 | 30.41 |
| AT3G14750.1 | Thale cress | nucleus, plastid | 26.46 | 28.7 |
| AT5G61920.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 17.83 | 26.89 |
| EES06432 | Sorghum | mitochondrion | 37.33 | 26.85 |
| AT1G55170.1 | Thale cress | nucleus | 20.61 | 26.15 |
| AT2G30120.5 | Thale cress | plastid | 16.43 | 20.07 |
Protein Annotations
| MapMan:35.1 | EntrezGene:843037 | UniProt:A0A178WGE5 | ProteinID:AAD10662.1 | ProteinID:AEE34608.1 | EMBL:AK228253 |
| ProteinID:ANM58321.1 | ArrayExpress:AT1G67170 | EnsemblPlantsGene:AT1G67170 | RefSeq:AT1G67170 | TAIR:AT1G67170 | RefSeq:AT1G67170-TAIR-G |
| EnsemblPlants:AT1G67170.1 | TAIR:AT1G67170.1 | Unigene:At.35681 | EMBL:BT005883 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 |
| RefSeq:NP_001320766.1 | RefSeq:NP_176888.2 | ProteinID:OAP16533.1 | PO:PO:0000293 | PANTHER:PTHR33405 | PANTHER:PTHR33405:SF5 |
| UniProt:Q84TD8 | UniParc:UPI0000060D8B | : | : | : | : |
Description
FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
Coordinates
chr1:+:25127173..25129457
Molecular Weight (calculated)
39744.9 Da
IEP (calculated)
7.494
GRAVY (calculated)
-0.840
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.