Factsheet for GSMUA_Achr1P19060_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P05710_001
GSMUA_Achr1P19920_001
GSMUA_Achr1P20460_001
GSMUA_Achr2P04570_001
GSMUA_Achr2P08320_001
GSMUA_Achr3P07830_001
GSMUA_Achr3P11230_001
GSMUA_Achr3P20190_001
GSMUA_Achr6P01670_001
GSMUA_Achr8P17120_001
GSMUA_Achr9P19550_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G67170.1	GSMUA_Achr3P07830_001	AT3G13990.1	21798944
AT1G67170.1	GSMUA_Achr3P20190_001	AT3G13990.1	21798944
AT1G67170.1	GSMUA_Achr1P19920_001	AT3G51180.1	21798944
AT1G67170.1	GSMUA_Achr3P11230_001	AT3G51180.1	21798944
AT1G67170.1	GSMUA_Achr2P08320_001	AT4G32570.1	21798944
AT1G67170.1	GSMUA_Achr6P01670_001	AT4G32570.1	21798944
AT1G67170.1	GSMUA_AchrUn_...	AT4G32570.1	21798944
AT1G67170.1	GSMUA_Achr8P17120_001	AT5G04170.1	21798944
AT1G67170.1	GSMUA_AchrUn_...	AT5G04170.1	21798944
AT1G67170.1	GSMUA_Achr10P...	AT5G61380.1	21798944
AT1G67170.1	GSMUA_Achr2P04570_001	AT5G61380.1	21798944
AT1G67170.1	GSMUA_Achr9P19550_001	AT5G61380.1	21798944
AT1G67170.1	GSMUA_Achr1P05710_001	AT5G64430.1	21798944
AT1G67170.1	GSMUA_Achr1P20460_001	AT5G64430.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0083g00450.t01	Wine grape	mitochondrion	59.35	59.35
GSMUA_Achr1P15680_001	Banana	endoplasmic reticulum, plasma membrane	31.41	57.14
Os02t0192100-01	Rice	mitochondrion	32.79	56.8
KRH01477	Soybean	nucleus	49.88	53.47
CDY12623	Canola	nucleus	36.95	50.47
AT1G67170.1	Thale cress	nucleus	41.11	49.58
CDY01786	Canola	cytosol	39.72	49.43
Bra004207.1-P	Field mustard	nucleus	39.03	49.13
CDX96108	Canola	cytosol, mitochondrion, nucleus, plastid	39.03	49.13
Bra034018.1-P	Field mustard	nucleus	33.95	48.04
Solyc02g065630.2.1	Tomato	nucleus	46.19	45.25
PGSC0003DMT400068308	Potato	plastid	46.88	44.91
HORVU6Hr1G034720.1	Barley	nucleus	46.19	43.96
TraesCS6D01G159700.1	Wheat	nucleus	47.34	43.9
TraesCS6B01G198100.1	Wheat	extracellular, mitochondrion, nucleus, plastid	47.81	43.67
TraesCS6A01G169900.1	Wheat	nucleus	46.88	43.47
EES06432	Sorghum	mitochondrion	45.73	39.68
GSMUA_Achr9P19990_001	Banana	cytosol	16.86	39.04
GSMUA_Achr6P28060_001	Banana	mitochondrion	27.02	36.79
CDY54119	Canola	mitochondrion	30.95	36.71
GSMUA_Achr8P21750_001	Banana	nucleus	22.86	35.36
GSMUA_Achr10P...	Banana	cytosol	21.48	30.39
GSMUA_Achr10P...	Banana	mitochondrion	19.4	28.0
GSMUA_Achr8P23090_001	Banana	cytosol	20.79	26.24

Protein Annotations

EnsemblPlants:GSMUA_Achr1P19060_001	EnsemblPlants:GSMUA_Achr1T19060_001	EnsemblPlantsGene:GSMUA_Achr1G19060_001	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF5
SEG:seg	UniParc:UPI000294B917	UniProt:M0S164	MapMan:35.1	:	:

Description

protein kinase PKN/PRK1, effector, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G19060_001]

Coordinates

chr1:+:14222332..14224921

Molecular Weight (calculated)

46897.6 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.797

Length

433 amino acids

Sequence
(BLAST)

001: MGSKGRIPPP HLRRPHPGPG LLHPDVFGPG IHPPPGAFPF DMLPPPEIME QKLDAQHVEM QRLAMENQRF MATHSSLRHE LAAAQQELQR LQTHMGVMQA
101: EQEQQLRMLM DKITKMEADL KTSEPVKAEL QQAHAEAQSL VAARQELISK VQQLTHDLQR SHGDVQQIPA LMSELEALRQ DYQHCRATYD YERKLRIDHY
201: ESLQVMEKNY VSMVREVEKL RAELTNATNL DRSGGQFGTN SATHKENDAS GHQPIGQNAY EDGYGAPQGH GPGSTVPYGG VVGSASAHTA QRGPEYDPSR
301: GPSYDASRAA AYDTARGDSY EGHRGTGYEA FTASRYDASK GAGVVPGAVV AGNPPYGSAH APPSYGVPPA YGSTQQVTYG SGQTPTAYGS SQGSRQTPAA
401: YSSTQQATYG SGQTPTRAGG GYEAPRGGNT LRR

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.