Factsheet for GSMUA_AchrUn_randomP01650_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g016400.2.1	Tomato	cytosol	73.18	54.13
GSMUA_Achr8P17120_001	Banana	cytosol, plasma membrane, plastid	82.12	52.69
PGSC0003DMT400033117	Potato	cytosol	72.63	50.58
VIT_00s0252g00130.t01	Wine grape	cytosol, plasma membrane, plastid	74.86	48.55
KRH33201	Soybean	endoplasmic reticulum	75.42	47.54
CDY56710	Canola	cytosol, extracellular, plastid	74.86	47.35
Zm00001d052458_P001	Maize	extracellular	77.09	46.62
EES09228	Sorghum	cytosol	77.65	45.72
Os12t0137100-01	Rice	cytosol, nucleus, plastid	73.74	45.21
TraesCS5B01G135100.1	Wheat	cytosol, nucleus, plastid	74.3	43.89
Os11t0140600-01	Rice	cytosol	74.86	43.51
CDY67472	Canola	cytosol	72.63	43.33
Bra034103.1-P	Field mustard	cytosol	74.86	42.01
CDY41334	Canola	cytosol	74.86	41.88
TraesCS4D01G127600.1	Wheat	cytosol	72.63	40.25
TraesCS4A01G186100.1	Wheat	golgi	72.63	40.0
TraesCS4B01G132800.1	Wheat	nucleus	73.18	39.94
Solyc10g079890.1.1	Tomato	plastid	74.86	39.41
PGSC0003DMT400076703	Potato	cytosol, plastid	75.42	39.24
TraesCS5D01G142800.1	Wheat	nucleus	72.63	39.16
TraesCS5A01G136100.1	Wheat	nucleus	72.63	39.04
AT5G04170.1	Thale cress	cytosol	73.18	37.01
Bra009480.1-P	Field mustard	cytosol	72.63	35.62
CDX70254	Canola	cytosol	72.07	35.34
GSMUA_Achr3P22660_001	Banana	plastid	46.37	35.17
HORVU5Hr1G043650.2	Barley	plastid	73.74	34.29
KRH72037	Soybean	cytosol, plasma membrane, plastid	47.49	32.82
Bra005797.1-P	Field mustard	cytosol	73.74	32.12
HORVU4Hr1G026030.9	Barley	cytosol	58.66	32.11
CDY41394	Canola	mitochondrion	72.07	31.93
CDX80907	Canola	cytosol	72.07	31.93
AT3G10300.6	Thale cress	cytosol	62.01	29.44

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP01650_001	EnsemblPlants:GSMUA_AchrUn_randomT01650_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG01650_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10183
PANTHER:PTHR10183:SF372	PFAM:PF13405	PFscan:PS50222	ScanProsite:PS00018	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000295854E	UniProt:M0U5H7	MapMan:35.1	:	:	:

Description

Probable calcium-binding protein CML49 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01650_001]

Coordinates

chrchrUn_random:+:6529741..6534378

Molecular Weight (calculated)

20603.7 Da

IEP (calculated)

8.654

GRAVY (calculated)

-0.264

Length

179 amino acids

Sequence
(BLAST)

001: MLFPELKNQF SRTQEKSLIH HESRPGFIDD KELQQALSSY NQSFSLRTVH LLMYLFTSSN VRKIGPKEFT SVFYSLQNWR AIFEAFDRDR SGKIDTMELR
101: EALRSLGFSV SPAVLDLLVT KFDKSGGKSK AIEYDNFIEC CLTVKGLTEK FKEKDTKYSG SATFTYESFM LTVLPFLIA

Best Arabidopsis Sequence Match ( AT3G10300.3 )
(BLAST)

001: MSGYPPSSQG YGYGGNPPPP QPPYGSTGNN PPPYGSSGSN PPPPYGSSAS SPYAVPYGAQ PAPYGAPPSA PYASLPGDHN KPHKEKPHGA SYGSPSPGGY
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA

Arabidopsis Description

Calcium-binding EF-hand family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.