Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 2
- cytosol 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 48.55 | 74.86 |
| Solyc04g016400.2.1 | Tomato | cytosol | 62.32 | 71.07 |
| KRH33201 | Soybean | endoplasmic reticulum | 68.12 | 66.2 |
| PGSC0003DMT400033117 | Potato | cytosol | 61.59 | 66.15 |
| CDY56710 | Canola | cytosol, extracellular, plastid | 67.03 | 65.37 |
| GSMUA_Achr8P17120_001 | Banana | cytosol, plasma membrane, plastid | 64.13 | 63.44 |
| Zm00001d052458_P001 | Maize | extracellular | 66.67 | 62.16 |
| Os12t0137100-01 | Rice | cytosol, nucleus, plastid | 64.86 | 61.3 |
| TraesCS5B01G135100.1 | Wheat | cytosol, nucleus, plastid | 67.03 | 61.06 |
| EES09228 | Sorghum | cytosol | 65.94 | 59.87 |
| Os11t0140600-01 | Rice | cytosol | 66.3 | 59.42 |
| Bra034103.1-P | Field mustard | cytosol | 68.12 | 58.93 |
| CDY41334 | Canola | cytosol | 68.12 | 58.75 |
| CDY67472 | Canola | cytosol | 60.87 | 56.0 |
| TraesCS5D01G142800.1 | Wheat | nucleus | 65.22 | 54.22 |
| TraesCS4D01G127600.1 | Wheat | cytosol | 63.04 | 53.87 |
| TraesCS5A01G136100.1 | Wheat | nucleus | 64.86 | 53.75 |
| TraesCS4B01G132800.1 | Wheat | nucleus | 63.41 | 53.35 |
| TraesCS4A01G186100.1 | Wheat | golgi | 61.96 | 52.62 |
| AT5G04170.1 | Thale cress | cytosol | 67.39 | 52.54 |
| Bra009480.1-P | Field mustard | cytosol | 68.12 | 51.51 |
| CDX70254 | Canola | cytosol | 65.22 | 49.32 |
| VIT_06s0080g00450.t01 | Wine grape | plastid | 39.13 | 48.0 |
| HORVU4Hr1G026030.9 | Barley | cytosol | 56.16 | 47.4 |
| HORVU5Hr1G043650.2 | Barley | plastid | 65.22 | 46.75 |
| CDX80907 | Canola | cytosol | 67.03 | 45.79 |
| CDY41394 | Canola | mitochondrion | 65.22 | 44.55 |
| AT3G10300.6 | Thale cress | cytosol | 59.06 | 43.24 |
| Bra005797.1-P | Field mustard | cytosol | 64.13 | 43.07 |
| KRH72037 | Soybean | cytosol, plasma membrane, plastid | 40.22 | 42.86 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100248601 | wikigene:100248601 | MapMan:35.1 | ProteinID:ADO16596 | ProteinID:ADO16596.1 |
| ProteinID:CCB57539 | ProteinID:CCB57539.1 | UniProt:E2JF17 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| EMBL:FN596242 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004198 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EMBL:HQ214155 | InterPro:IPR002048 | EntrezGene:LOC100248601 |
| wikigene:LOC100248601 | RefSeq:NP_001267893.1 | PFAM:PF00036 | PFAM:PF13202 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10183 | PANTHER:PTHR10183:SF372 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:TC55597 | TIGR:TC67761 |
| UniParc:UPI0001983E79 | ArrayExpress:VIT_00s0252g00130 | EnsemblPlantsGene:VIT_00s0252g00130 | EnsemblPlants:VIT_00s0252g00130.t01 | SEG:seg | : |
Description
EF-hand calcium-binding protein [Source:UniProtKB/TrEMBL;Acc:E2JF17]
Coordinates
chrUn:-:17696021..17697610
Molecular Weight (calculated)
29713.0 Da
IEP (calculated)
6.673
GRAVY (calculated)
-0.329
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGYPHAPPG HGYGYGAPPP AQPYSATPYG APAPQGYQPY APVATPYGAP SAPYAAPGEK PPKENKPHGG SSHQPPPSSM GGYPPSAPGF GSPFALLVPS
101: AFPPGTDPNV VACFQMADQD GSGFIDDKEL QGALSSYNQR FSLRTVHLLM YLFTNSNARK IGPKEFTAVF YSLQNWRAIF ENFDRDRSGK IEAGELREAL
201: MSLGFAVSPV VLDLLLSKFD KSGGRNKAIE YDNFIECCLT VKGLTEKFKE KDSSFSGSAT FSYENFMLTV LPFLIA
101: AFPPGTDPNV VACFQMADQD GSGFIDDKEL QGALSSYNQR FSLRTVHLLM YLFTNSNARK IGPKEFTAVF YSLQNWRAIF ENFDRDRSGK IEAGELREAL
201: MSLGFAVSPV VLDLLLSKFD KSGGRNKAIE YDNFIECCLT VKGLTEKFKE KDSSFSGSAT FSYENFMLTV LPFLIA
001: MSGYPPSSQG YGYGGNPPPP QPPYGSTGNN PPPYGSSGSN PPPPYGSSAS SPYAVPYGAQ PAPYGAPPSA PYASLPGDHN KPHKEKPHGA SYGSPSPGGY
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA
Arabidopsis Description
Calcium-binding EF-hand family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.