Factsheet for HORVU5Hr1G043650.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09228	Sorghum	cytosol	63.12	79.93
TraesCS5B01G135100.1	Wheat	cytosol, nucleus, plastid	62.6	79.54
Zm00001d052458_P001	Maize	extracellular	60.26	78.38
GSMUA_AchrUn_...	Banana	cytosol	34.29	73.74
Os12t0137100-01	Rice	cytosol, nucleus, plastid	52.73	69.52
Os11t0140600-01	Rice	cytosol	54.29	67.86
GSMUA_Achr8P17120_001	Banana	cytosol, plasma membrane, plastid	48.57	67.03
PGSC0003DMT400033117	Potato	cytosol	43.9	65.76
CDY56710	Canola	cytosol, extracellular, plastid	48.31	65.72
Solyc04g016400.2.1	Tomato	cytosol	41.3	65.7
KRH33201	Soybean	endoplasmic reticulum	48.31	65.49
VIT_00s0252g00130.t01	Wine grape	cytosol, plasma membrane, plastid	46.75	65.22
CDY41334	Canola	cytosol	51.69	62.19
Bra034103.1-P	Field mustard	cytosol	51.43	62.07
TraesCS5D01G142800.1	Wheat	nucleus	53.51	62.05
TraesCS5A01G136100.1	Wheat	nucleus	53.51	61.86
Solyc10g079890.1.1	Tomato	plastid	52.47	59.41
PGSC0003DMT400076703	Potato	cytosol, plastid	52.21	58.43
HORVU4Hr1G026030.9	Barley	cytosol	49.09	57.8
CDY67472	Canola	cytosol	44.42	57.0
Bra009480.1-P	Field mustard	cytosol	49.35	52.05
AT5G04170.1	Thale cress	cytosol	47.53	51.69
CDX70254	Canola	cytosol	47.27	49.86
CDY41394	Canola	mitochondrion	48.05	45.79
CDX80907	Canola	cytosol	48.05	45.79
AT3G10300.6	Thale cress	cytosol	42.34	43.24
KRH72037	Soybean	cytosol, plasma membrane, plastid	28.57	42.47
Bra005797.1-P	Field mustard	cytosol	44.94	42.09
HORVU7Hr1G027810.6	Barley	cytosol	28.83	40.96

Protein Annotations

EnsemblPlants:HORVU5Hr1G043650.2	EnsemblPlantsGene:HORVU5Hr1G043650	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10183	PANTHER:PTHR10183:SF372
PFAM:PF13202	PFAM:PF13405	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000B4748F5	UniProt:A0A287QZK8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:+:336904856..336907780

Molecular Weight (calculated)

39844.5 Da

IEP (calculated)

8.570

GRAVY (calculated)

-0.399

Length

385 amino acids

Sequence
(BLAST)

001: MACASRVIIL PPSPVSSHKN WCQPSFTVRK PPSPPRRDSP HPIPQAPPPK LDRPTMSGYP YGGAGGGGGY GAPPPYGSSP APSAPPYGDK PPKEAKASSP
101: YYASPPQAYG AGGAGGGGGG YGAPPSSQPQ SYGGGYGAPP PSQPQSYGGG GYGAPPASYG GGGYGAPPSA QPYGAPPPSS ASYGAPPPAA APYGAAGGYG
201: SPFAALVPSA FPPGTDPNVV ACFQAADRDG SGTIDDKELQ SALSGYNQSF SIRTVHLLMY LFTNTNVRRI GPKEFTSVFY SLQNWRSIFE RFDRDRSGKI
301: DASELRDALL SLGYSVSPTV LDLLVSKFDK TGGMSKAVEY DNFIECCLTV KGLTEKFKEK DTAYSGSATF SYEAFMLTVL PFIIA

Best Arabidopsis Sequence Match ( AT3G10300.3 )
(BLAST)

001: MSGYPPSSQG YGYGGNPPPP QPPYGSTGNN PPPYGSSGSN PPPPYGSSAS SPYAVPYGAQ PAPYGAPPSA PYASLPGDHN KPHKEKPHGA SYGSPSPGGY
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA

Arabidopsis Description

Calcium-binding EF-hand family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.