Factsheet for HORVU7Hr1G027810.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G013190.8
HORVU5Hr1G018870.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27480.1	HORVU4Hr1G013190.8	AT1G49840.1	21798944
AT2G27480.1	HORVU5Hr1G018870.3	AT1G49840.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G133400.1	Wheat	cytosol	67.16	70.27
TraesCS7A01G134000.1	Wheat	cytosol	63.47	66.93
TraesCS7B01G035100.1	Wheat	cytosol	63.47	63.47
Os08t0558100-01	Rice	cytosol	57.93	62.06
Zm00001d049940_P002	Maize	cytosol	58.67	61.87
EES14088	Sorghum	cytosol	59.04	59.26
VIT_06s0080g00450.t01	Wine grape	plastid	46.13	55.56
GSMUA_Achr3P22660_001	Banana	plastid	48.34	55.51
KRH26648	Soybean	cytosol, plastid	40.59	51.64
KRH22671	Soybean	cytosol, plastid	41.33	51.38
Solyc11g068460.1.1	Tomato	cytosol, plastid	44.28	48.19
CDY31179	Canola	cytosol	37.27	45.29
CDX83268	Canola	cytosol	36.9	44.84
Bra000510.1-P	Field mustard	cytosol	36.53	44.39
AT2G27480.1	Thale cress	cytosol, nucleus, peroxisome	35.06	41.67
PGSC0003DMT400067730	Potato	cytosol, plastid	37.64	35.17
HORVU5Hr1G043650.2	Barley	plastid	40.96	28.83
HORVU4Hr1G026030.9	Barley	cytosol	32.47	26.91

Protein Annotations

EnsemblPlants:HORVU7Hr1G027810.6	EnsemblPlantsGene:HORVU7Hr1G027810	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10183	PANTHER:PTHR10183:SF372
PFAM:PF13202	PFAM:PF13405	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000B488339	UniProt:A0A287VUT0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr7H:+:49763061..49765140

Molecular Weight (calculated)

29438.6 Da

IEP (calculated)

8.413

GRAVY (calculated)

-0.364

Length

271 amino acids

Sequence
(BLAST)

001: HRRFVIGCHR TPPPSTPRDL LASLAMADYN RYGHAHGQGY GQQGYGYAPS APPAPTPSSS SSYGYAPSAS SPYGYGYGRG GYPPPPMGGF GGAVAFPPGT
101: HPDVERAFRA VDRDRSGSID EGELQAALSG AYHRFSIRTV RLLIFLFSDA SPRSRMGPAE FATLWNCLGQ WRVVFDRYDR DRSGKIESNE LREALRGLGY
201: AVPPAVIDLL IANYNNGVSN RGALDFDNFV ECGMVVKGLT EKFKENDTRH TGSAALSYDG FLSMVIPFIV P

Best Arabidopsis Sequence Match ( AT2G27480.1 )
(BLAST)

001: MSYSNAYAPS APELPESFVQ QQHDGESRYT YAYPSYQPTQ QFSSYSGMFS PETHPEIVRS FESADRNRSG FLEESELRQA LSLSGYDGIS NRTIRLLLFI
101: YKIPVDSLLR LGPKEYVELW NCLAQWRAIF NRYDRDRSGK MNSTQLRDAF YNLGCVLPTS VHQLIVSQFD DGTGKTVDLC FDSFLECGMI VKGLTEKFRE
201: NDPGYTGYAT LSYDVFMLMV IPFIATYD

Arabidopsis Description

CML48Probable calcium-binding protein CML48 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQH1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.