Factsheet for Os08t0558100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0606100-01
Os07t0591100-01
Os12t0581300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27480.1	Os03t0606100-01	AT1G49840.1	21798944
AT2G27480.1	Os07t0591100-01	AT1G49840.1	21798944
AT2G27480.1	Os12t0581300-01	AT1G49840.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G134000.1	Wheat	cytosol	69.96	68.87
TraesCS7D01G133400.1	Wheat	cytosol	68.77	67.18
Zm00001d049940_P002	Maize	cytosol	67.19	66.15
TraesCS7B01G035100.1	Wheat	cytosol	69.57	64.94
EES14088	Sorghum	cytosol	68.77	64.44
GSMUA_Achr3P22660_001	Banana	plastid	56.52	60.59
KRH22671	Soybean	cytosol, plastid	51.78	60.09
HORVU7Hr1G027810.6	Barley	cytosol	62.06	57.93
VIT_06s0080g00450.t01	Wine grape	plastid	50.59	56.89
KRH26648	Soybean	cytosol, plastid	47.43	56.34
Solyc11g068460.1.1	Tomato	cytosol, plastid	49.01	49.8
CDX83268	Canola	cytosol	41.11	46.64
CDY31179	Canola	cytosol	40.71	46.19
Bra000510.1-P	Field mustard	cytosol	40.32	45.74
AT2G27480.1	Thale cress	cytosol, nucleus, peroxisome	40.71	45.18
Os12t0137100-01	Rice	cytosol, nucleus, plastid	46.25	40.07
Os11t0140600-01	Rice	cytosol	46.25	37.99
PGSC0003DMT400067730	Potato	cytosol, plastid	41.5	36.21

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:4346304	EMBL:AK099458	ProteinID:BAD09091.1	ProteinID:BAD13126.1
ProteinID:BAF24405.1	ProteinID:BAT06673.1	ProteinID:EEE69142.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004198	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	InterPro:IPR002048	EnsemblPlantsGene:Os08g0558100	EnsemblPlants:Os08t0558100-01	PFAM:PF00036
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10183	PANTHER:PTHR10183:SF372	UniProt:Q6YZJ1	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000023AD04	RefSeq:XP_015650482.1	SEG:seg	:	:

Description

EF hand domain containing protein. (Os08t0558100-01)

Coordinates

chr8:-:27931885..27934321

Molecular Weight (calculated)

27458.1 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.389

Length

253 amino acids

Sequence
(BLAST)

001: MADYNRYGYG GYGSTPSAPP ASSYGYTTTP SAPPASSSSS YGYGHGGGGY PSSTYPPPPP SSSQAYPMGM GGFLVFPPGT HPDVERAFRA VDRDGSGSID
101: ERELQDALSS AYHRFSIRTV RLLLFLFNKP ASHSPSRMGP AEFVSLWNCL GQWRGIFDRY DRDGSGKIEK DELREALRSL GYAVPPSVLE LLIANYNNGV
201: SSRGALDFDN FVECGMIVKG LTEKFKEKDT RYSGSATLSY DGFLSMVIPF IVP

Best Arabidopsis Sequence Match ( AT2G27480.1 )
(BLAST)

001: MSYSNAYAPS APELPESFVQ QQHDGESRYT YAYPSYQPTQ QFSSYSGMFS PETHPEIVRS FESADRNRSG FLEESELRQA LSLSGYDGIS NRTIRLLLFI
101: YKIPVDSLLR LGPKEYVELW NCLAQWRAIF NRYDRDRSGK MNSTQLRDAF YNLGCVLPTS VHQLIVSQFD DGTGKTVDLC FDSFLECGMI VKGLTEKFRE
201: NDPGYTGYAT LSYDVFMLMV IPFIATYD

Arabidopsis Description

CML48Probable calcium-binding protein CML48 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQH1]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.