Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0137100-01 | Rice | cytosol, nucleus, plastid | 92.86 | 97.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.51 | 74.86 |
| EES09228 | Sorghum | cytosol | 73.38 | 74.34 |
| Zm00001d052458_P001 | Maize | extracellular | 70.78 | 73.65 |
| TraesCS5D01G142800.1 | Wheat | nucleus | 79.22 | 73.49 |
| TraesCS5A01G136100.1 | Wheat | nucleus | 78.57 | 72.67 |
| Solyc04g016400.2.1 | Tomato | cytosol | 55.19 | 70.25 |
| TraesCS5B01G135100.1 | Wheat | cytosol, nucleus, plastid | 68.83 | 69.97 |
| GSMUA_Achr8P17120_001 | Banana | cytosol, plasma membrane, plastid | 62.99 | 69.53 |
| CDY56710 | Canola | cytosol, extracellular, plastid | 63.31 | 68.9 |
| KRH33201 | Soybean | endoplasmic reticulum | 63.31 | 68.66 |
| PGSC0003DMT400033117 | Potato | cytosol | 56.17 | 67.32 |
| VIT_00s0252g00130.t01 | Wine grape | cytosol, plasma membrane, plastid | 59.42 | 66.3 |
| Bra034103.1-P | Field mustard | cytosol | 65.26 | 63.01 |
| CDY41334 | Canola | cytosol | 65.26 | 62.81 |
| CDY67472 | Canola | cytosol | 57.79 | 59.33 |
| Solyc10g079890.1.1 | Tomato | plastid | 64.94 | 58.82 |
| PGSC0003DMT400076703 | Potato | cytosol, plastid | 65.58 | 58.72 |
| AT5G04170.1 | Thale cress | cytosol | 62.66 | 54.52 |
| HORVU5Hr1G043650.2 | Barley | plastid | 67.86 | 54.29 |
| CDX70254 | Canola | cytosol | 61.69 | 52.05 |
| Bra009480.1-P | Field mustard | cytosol | 60.71 | 51.23 |
| CDY41394 | Canola | mitochondrion | 62.01 | 47.28 |
| CDX80907 | Canola | cytosol | 62.01 | 47.28 |
| Os08t0558100-01 | Rice | cytosol | 37.99 | 46.25 |
| AT3G10300.6 | Thale cress | cytosol | 56.17 | 45.89 |
| KRH72037 | Soybean | cytosol, plasma membrane, plastid | 36.69 | 43.63 |
| Bra005797.1-P | Field mustard | cytosol | 58.12 | 43.55 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4349736 | ProteinID:ABA91405.1 | EMBL:AK103409 | ProteinID:BAF27556.1 |
| ProteinID:BAT12609.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004198 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR002048 | EnsemblPlantsGene:Os11g0140600 | EnsemblPlants:Os11t0140600-01 | PFAM:PF13202 | PFAM:PF13405 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR10183 | PANTHER:PTHR10183:SF372 | UniProt:Q2RAR8 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00006824F1 | RefSeq:XP_015617815.1 | SEG:seg | : | : | : |
Description
EF-Hand type domain containing protein. (Os11t0140600-01)
Coordinates
chr11:-:1869163..1872206
Molecular Weight (calculated)
32229.5 Da
IEP (calculated)
5.989
GRAVY (calculated)
-0.409
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYPPNPGS GYPYGGAGGY GAPPPPYGSS PAPSAPPYGE KPPKEGKTSS SSAPYYGGGG GYGAPPSTQP YGSGGGYGAP PSTQRPQSYG GGYGAPPSSQ
101: PYGAPYGAPP PSSAPYGAPG GYGSPFASLV PSAFPPGTDP NVVACFQAAD RDGSGMIDDK ELQSALSGYS QSFSLRTVHL LMYLFTNTNV RKIGPKEFTS
201: VFYSLQNWRS IFERFDRDQS GKIDATELRD ALLSLGYSVS PTVLDLLVSK FDKTGGKNKA IEYDNFIECC LTVKGLTEKF KEKDTAFSGS ATFTYEAFML
301: TVLPFLIA
101: PYGAPYGAPP PSSAPYGAPG GYGSPFASLV PSAFPPGTDP NVVACFQAAD RDGSGMIDDK ELQSALSGYS QSFSLRTVHL LMYLFTNTNV RKIGPKEFTS
201: VFYSLQNWRS IFERFDRDQS GKIDATELRD ALLSLGYSVS PTVLDLLVSK FDKTGGKNKA IEYDNFIECC LTVKGLTEKF KEKDTAFSGS ATFTYEAFML
301: TVLPFLIA
001: MSGYPPSSQG YGYGGNPPPP QPPYGSTGNN PPPYGSSGSN PPPPYGSSAS SPYAVPYGAQ PAPYGAPPSA PYASLPGDHN KPHKEKPHGA SYGSPSPGGY
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA
Arabidopsis Description
Calcium-binding EF-hand family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.