Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052458_P001 | Maize | extracellular | 84.54 | 86.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.72 | 77.65 |
| TraesCS5B01G135100.1 | Wheat | cytosol, nucleus, plastid | 74.67 | 74.92 |
| Os12t0137100-01 | Rice | cytosol, nucleus, plastid | 71.71 | 74.66 |
| Os11t0140600-01 | Rice | cytosol | 74.34 | 73.38 |
| GSMUA_Achr8P17120_001 | Banana | cytosol, plasma membrane, plastid | 64.47 | 70.25 |
| Solyc04g016400.2.1 | Tomato | cytosol | 55.92 | 70.25 |
| TraesCS4D01G127600.1 | Wheat | cytosol | 74.34 | 69.97 |
| TraesCS4B01G132800.1 | Wheat | nucleus | 74.67 | 69.21 |
| TraesCS4A01G186100.1 | Wheat | golgi | 73.68 | 68.92 |
| PGSC0003DMT400033117 | Potato | cytosol | 58.22 | 68.87 |
| KRH33201 | Soybean | endoplasmic reticulum | 64.14 | 68.66 |
| CDY56710 | Canola | cytosol, extracellular, plastid | 63.16 | 67.84 |
| VIT_00s0252g00130.t01 | Wine grape | cytosol, plasma membrane, plastid | 59.87 | 65.94 |
| CDY41334 | Canola | cytosol | 67.43 | 64.06 |
| Bra034103.1-P | Field mustard | cytosol | 67.11 | 63.95 |
| HORVU5Hr1G043650.2 | Barley | plastid | 79.93 | 63.12 |
| Solyc10g079890.1.1 | Tomato | plastid | 69.74 | 62.35 |
| HORVU4Hr1G026030.9 | Barley | cytosol | 66.78 | 62.08 |
| TraesCS5D01G142800.1 | Wheat | nucleus | 67.43 | 61.75 |
| PGSC0003DMT400076703 | Potato | cytosol, plastid | 69.74 | 61.63 |
| TraesCS5A01G136100.1 | Wheat | nucleus | 67.43 | 61.56 |
| CDY67472 | Canola | cytosol | 57.89 | 58.67 |
| AT5G04170.1 | Thale cress | cytosol | 64.8 | 55.65 |
| Bra009480.1-P | Field mustard | cytosol | 64.14 | 53.42 |
| CDX70254 | Canola | cytosol | 63.49 | 52.88 |
| CDX80907 | Canola | cytosol | 65.13 | 49.01 |
| CDY41394 | Canola | mitochondrion | 63.82 | 48.02 |
| AT3G10300.6 | Thale cress | cytosol | 56.91 | 45.89 |
| Bra005797.1-P | Field mustard | cytosol | 60.53 | 44.77 |
| KRH72037 | Soybean | cytosol, plasma membrane, plastid | 36.84 | 43.24 |
| EES14088 | Sorghum | cytosol | 36.51 | 41.11 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:8069284 | UniProt:C5Y461 | EnsemblPlants:EES09228 | ProteinID:EES09228 |
| ProteinID:EES09228.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004198 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR002048 | PFAM:PF13202 | PFAM:PF13405 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10183 |
| PANTHER:PTHR10183:SF372 | SMART:SM00054 | EnsemblPlantsGene:SORBI_3005G028700 | SUPFAM:SSF47473 | unigene:Sbi.6055 | UniParc:UPI0001A867B9 |
| RefSeq:XP_002450240.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:2560176..2569307
Molecular Weight (calculated)
31719.0 Da
IEP (calculated)
6.524
GRAVY (calculated)
-0.434
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYPPPGSG YPYGPGGGGG GYGAPPPYGS SPAPSAPPYG ETKPPKEGKT SSSSSSGGSA PPYYGGAPPP SHPSYGGGGG YGAPPPQYGA PPPQQYGAPP
101: PQSYGGGPPA PYGGGGYGGS PFASLVPSAF PPGTDPNVVA CFQAADRDGS GMIDDKELQS ALSGYNQSFS LRTVHLLMYL FTNTNVRKIG PKEFTSVFYS
201: LQNWRAIFER FDRDRSGRID TSELRDALLS LGYSVSPTVL DLLVSKFDKT GGKSKAIEYD NFIECCLTVK GLTEKFKEKD TAYSGSATFT YEAFMLTVLP
301: FLIA
101: PQSYGGGPPA PYGGGGYGGS PFASLVPSAF PPGTDPNVVA CFQAADRDGS GMIDDKELQS ALSGYNQSFS LRTVHLLMYL FTNTNVRKIG PKEFTSVFYS
201: LQNWRAIFER FDRDRSGRID TSELRDALLS LGYSVSPTVL DLLVSKFDKT GGKSKAIEYD NFIECCLTVK GLTEKFKEKD TAYSGSATFT YEAFMLTVLP
301: FLIA
001: MSGYPPTSQG YGYGYGGGNQ PPPPQPPYSS GGNNPPYGSS TTSSPYAVPY GASKPQSSSS SAPTYGSSSY GAPPPSAPYA PSPGDYNKPP KEKPYGGGYG
101: APPPSGSSDY GSYGAGPRPS QPSGHGGGYG ATPPHGVSDY GSYGGAPPRP ASSGHGGGYG GYPPQASYGS PFASLIPSGF APGTDPNIVA CFQAADQDGS
201: GFIDDKELQG ALSSYQQRFS MRTVHLLMYL FTNSNAMKIG PKEFTALFYS LQNWRSIFER SDKDRSGRID VNELRDALLS LGFSVSPVVL DLLVSKFDKS
301: GGKNRAIEYD NFIECCLTVK GLTEKFKEKD TAYSGSATFN YESFMLTVLP FLIA
101: APPPSGSSDY GSYGAGPRPS QPSGHGGGYG ATPPHGVSDY GSYGGAPPRP ASSGHGGGYG GYPPQASYGS PFASLIPSGF APGTDPNIVA CFQAADQDGS
201: GFIDDKELQG ALSSYQQRFS MRTVHLLMYL FTNSNAMKIG PKEFTALFYS LQNWRSIFER SDKDRSGRID VNELRDALLS LGFSVSPVVL DLLVSKFDKS
301: GGKNRAIEYD NFIECCLTVK GLTEKFKEKD TAYSGSATFN YESFMLTVLP FLIA
Arabidopsis Description
CML50Probable calcium-binding protein CML50 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.