Factsheet for Os12t0137100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0140600-01	Rice	cytosol	97.95	92.86
GSMUA_AchrUn_...	Banana	cytosol	45.21	73.74
TraesCS5D01G142800.1	Wheat	nucleus	82.53	72.59
TraesCS5A01G136100.1	Wheat	nucleus	81.85	71.77
EES09228	Sorghum	cytosol	74.66	71.71
Zm00001d052458_P001	Maize	extracellular	72.6	71.62
Solyc04g016400.2.1	Tomato	cytosol	57.53	69.42
GSMUA_Achr8P17120_001	Banana	cytosol, plasma membrane, plastid	66.1	69.18
TraesCS5B01G135100.1	Wheat	cytosol, nucleus, plastid	71.23	68.65
KRH33201	Soybean	endoplasmic reticulum	65.41	67.25
CDY56710	Canola	cytosol, extracellular, plastid	65.07	67.14
PGSC0003DMT400033117	Potato	cytosol	57.53	65.37
VIT_00s0252g00130.t01	Wine grape	cytosol, plasma membrane, plastid	61.3	64.86
Bra034103.1-P	Field mustard	cytosol	67.12	61.44
CDY41334	Canola	cytosol	67.12	61.25
CDY67472	Canola	cytosol	60.62	59.0
Solyc10g079890.1.1	Tomato	plastid	67.12	57.65
PGSC0003DMT400076703	Potato	cytosol, plastid	67.81	57.56
AT5G04170.1	Thale cress	cytosol	65.07	53.67
HORVU5Hr1G043650.2	Barley	plastid	69.52	52.73
CDX70254	Canola	cytosol	65.41	52.33
Bra009480.1-P	Field mustard	cytosol	63.7	50.96
CDY41394	Canola	mitochondrion	65.75	47.52
Os08t0558100-01	Rice	cytosol	40.07	46.25
CDX80907	Canola	cytosol	63.7	46.04
AT3G10300.6	Thale cress	cytosol	57.53	44.56
KRH72037	Soybean	cytosol, plasma membrane, plastid	39.38	44.4
Bra005797.1-P	Field mustard	cytosol	60.96	43.31

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	ProteinID:ABA95760.1	EMBL:AK059278	ProteinID:BAF29125.1	ProteinID:BAT15805.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004198
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR002048
EnsemblPlantsGene:Os12g0137100	EnsemblPlants:Os12t0137100-01	PFAM:PF13202	PFAM:PF13405	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10183	PANTHER:PTHR10183:SF372	UniProt:Q2QY10	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0000681AAE
SEG:seg	:	:	:	:	:

Description

CALCIUM-BINDING PROTEINEF-Hand type domain containing protein. (Os12t0137100-01)

Coordinates

chr12:-:1794439..1797343

Molecular Weight (calculated)

30594.7 Da

IEP (calculated)

7.162

GRAVY (calculated)

-0.345

Length

292 amino acids

Sequence
(BLAST)

001: MAGYPPNPGS GYPYGGAGGY GAPPPPYGSS PAPSAPPYGA KPPKEGKTSS SSAPYYGGGG GYGAPPSTQP YGSGGGYGAP PSSQPYGAPY GAPPPSSAPY
101: GAPGGYGSPF ASLVPSAFPP GTDPNVVACF QAADRDGSGM IDDKELQSAL SGYSQSFSLR TVHLLMYLFT NTNVRKIGPK EFTSVFYSLQ NWRSIFERFD
201: RDRSGKIDAT ELRDALLSLG YSVSPTVLDL LVSKFDKTGG KNKAIEYDNF IECCLTVKGL TEKFKEKDTA FSGSATFTYE AFMLTVLPFL IA

Best Arabidopsis Sequence Match ( AT3G10300.3 )
(BLAST)

001: MSGYPPSSQG YGYGGNPPPP QPPYGSTGNN PPPYGSSGSN PPPPYGSSAS SPYAVPYGAQ PAPYGAPPSA PYASLPGDHN KPHKEKPHGA SYGSPSPGGY
101: GAHPSSGPSD YGGYGGAPQQ SGHGGGYGGA PQQSGHGGGY GAPPPQASYG SPFASLVPSA FPPGTDPNIV ACFQAADRDN SGFIDDKELQ GALSSYNQSF
201: SIRTVHLLMY LFTNSNVRKI GPKEFTSLFF SLQNWRSIFE RFDKDRSGRI DTNELRDALM SLGFSVSPVI LDLLVSKFDK SGGRNRAIEY DNFIECCLTV
301: KGLTEKFKEK DTALSGSAIF NYENFMLTVL PFLVA

Arabidopsis Description

Calcium-binding EF-hand family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.