Factsheet for GSMUA_Achr6P28060_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g01830.t01	Wine grape	cytosol, mitochondrion	45.91	48.03
KRH18932	Soybean	mitochondrion	37.11	42.29
PGSC0003DMT400029024	Potato	mitochondrion	34.59	35.37
Solyc07g006260.2.1	Tomato	mitochondrion, nucleus	34.28	35.05
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	22.33	33.97
CDX86949	Canola	mitochondrion, nucleus, peroxisome, plastid	23.27	32.6
Os04t0479100-01	Rice	cytosol	41.51	32.51
CDY00237	Canola	mitochondrion	22.96	32.44
GSMUA_Achr9P19990_001	Banana	cytosol	18.24	31.02
GSMUA_Achr8P21750_001	Banana	nucleus	26.1	29.64
AT5G61920.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	21.38	28.57
OQU81803	Sorghum	nucleus, plastid	39.31	28.22
GSMUA_Achr1P15680_001	Banana	endoplasmic reticulum, plasma membrane	21.07	28.15
GSMUA_Achr1P19060_001	Banana	cytosol, mitochondrion, nucleus, plastid	36.79	27.02
Zm00001d025689_P002	Maize	cytosol	39.94	26.51
TraesCS6D01G330600.1	Wheat	mitochondrion	36.48	26.19
TraesCS6A01G347500.1	Wheat	mitochondrion	36.79	25.83
GSMUA_Achr10P...	Banana	cytosol	24.84	25.82
TraesCS6B01G381000.1	Wheat	mitochondrion	36.48	25.11
Zm00001d003291_P002	Maize	mitochondrion, plastid	39.31	24.37
GSMUA_Achr10P...	Banana	mitochondrion	22.64	24.0
GSMUA_Achr8P23090_001	Banana	cytosol	25.79	23.91

Protein Annotations

EnsemblPlants:GSMUA_Achr6P28060_001	EnsemblPlants:GSMUA_Achr6T28060_001	EnsemblPlantsGene:GSMUA_Achr6G28060_001	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF4
PFAM:PD936484	UniParc:UPI000295BCD5	UniProt:M0TAV1	MapMan:35.1	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G28060_001]

Coordinates

chr6:-:28508717..28512123

Molecular Weight (calculated)

35022.5 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.692

Length

318 amino acids

Sequence
(BLAST)

001: MDAHGRMPSS YGRRPIQAPG MMRHGPLPGP GPADHHPREA LLPPEHLEKK VAIQEAEMER IARENQRFAE SNVAMRQELV ATQKEMQRVQ AYLGSIHTES
101: DIQIRGLLEK IGKLEDDIHS GDVVKKELQQ AHLEAQNLIT VRQELSAEIQ VVTEELQKST AGFKKLPEMH SELDGLRQEH QTLRATFEYE KGLNIEQVER
201: MRAMEKNLMS MAKEVERLRA EVTAPNQYGG MHQTAGQGTG YPNHSFSMGG GGYMAGSHVP IVNYADAGFG YANPAHYTEA HGRPQAHMTS GASAEGIDSY
301: GGMSTASGTN IYGGSQAR

Best Arabidopsis Sequence Match ( AT1G67170.1 )
(BLAST)

001: MESKGRIHPS HHHMRRPLPG PGGCIAHPET FGNHGAIPPS AAQGVYPSFN MLPPPEVMEQ KFVAQHGELQ RLAIENQRLG GTHGSLRQEL AAAQHEIQML
101: HAQIGSMKSE REQRMMGLAE KVAKMETELQ KSEAVKLEMQ QARAEARSLV VAREELMSKV HQLTQELQKS RSDVQQIPAL MSELENLRQE YQQCRATYDY
201: EKKFYNDHLE SLQAMEKNYM TMAREVEKLQ AQLMNNANSD RRAGGPYGNN INAEIDASGH QSGNGYYEDA FGPQGYIPQP VAGNATGPNS VVGAAQYPYQ
301: GVTQPGYFPQ RPGYNFPRGP PGSYDPTTRL PTGPYGAPFP PGPSNNTPYA GTHGNPSRR

Arabidopsis Description

FLXL2Protein FLX-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84TD8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.