Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86949 | Canola | mitochondrion, nucleus, peroxisome, plastid | 76.05 | 79.74 |
| Bra010043.1-P | Field mustard | nucleus, peroxisome, plasma membrane, plastid | 69.75 | 79.43 |
| CDY00237 | Canola | mitochondrion | 73.53 | 77.78 |
| KRH18932 | Soybean | mitochondrion | 33.61 | 28.67 |
| VIT_14s0030g01830.t01 | Wine grape | cytosol, mitochondrion | 34.03 | 26.64 |
| Solyc07g006260.2.1 | Tomato | mitochondrion, nucleus | 33.61 | 25.72 |
| PGSC0003DMT400029024 | Potato | mitochondrion | 32.77 | 25.08 |
| GSMUA_Achr6P28060_001 | Banana | mitochondrion | 28.57 | 21.38 |
| AT1G55170.1 | Thale cress | nucleus | 25.21 | 21.2 |
| AT2G30120.5 | Thale cress | plastid | 25.21 | 20.41 |
| AT3G14750.1 | Thale cress | nucleus, plastid | 27.73 | 19.94 |
| AT1G67170.1 | Thale cress | nucleus | 26.89 | 17.83 |
| OQU81803 | Sorghum | nucleus, plastid | 30.67 | 16.48 |
| Os04t0479100-01 | Rice | cytosol | 27.73 | 16.26 |
| Zm00001d025689_P002 | Maize | cytosol | 30.25 | 15.03 |
| TraesCS6D01G330600.1 | Wheat | mitochondrion | 27.73 | 14.9 |
| TraesCS6A01G347500.1 | Wheat | mitochondrion | 28.15 | 14.79 |
| TraesCS6B01G381000.1 | Wheat | mitochondrion | 28.15 | 14.5 |
| Zm00001d003291_P002 | Maize | mitochondrion, plastid | 31.09 | 14.43 |
Protein Annotations
| MapMan:35.1 | EntrezGene:836313 | UniProt:A0A178USJ6 | ProteinID:AED97536.1 | ProteinID:AED97537.1 | ProteinID:ANM70292.1 |
| ProteinID:ANM70294.1 | ProteinID:ANM70295.1 | ArrayExpress:AT5G61920 | EnsemblPlantsGene:AT5G61920 | RefSeq:AT5G61920 | TAIR:AT5G61920 |
| RefSeq:AT5G61920-TAIR-G | EnsemblPlants:AT5G61920.1 | TAIR:AT5G61920.1 | Unigene:At.55672 | ProteinID:BAB08878.1 | ncoils:Coil |
| EMBL:DQ447104 | GO:GO:0000003 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0030154 | RefSeq:NP_001119474.1 | RefSeq:NP_001331914.1 | RefSeq:NP_001331916.1 | RefSeq:NP_001331917.1 |
| RefSeq:NP_200998.1 | ProteinID:OAO96124.1 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0025022 | PANTHER:PTHR33405 | PANTHER:PTHR33405:SF4 | UniProt:Q9FH51 | UniParc:UPI00000A28AB |
| SEG:seg | : | : | : | : | : |
Description
FLXL4FLX4 [Source:UniProtKB/TrEMBL;Acc:A0A178USJ6]
Coordinates
chr5:+:24864302..24866019
Molecular Weight (calculated)
27087.1 Da
IEP (calculated)
9.762
GRAVY (calculated)
-0.895
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRERIGSN HHSRVSQGMS TSGSSSSRHH DTISSTSDPR HLRDHQISLS DILENKIAVQ AAEIDRLSND NRKLASSYVA LKEDLTVADR EVQGLRAHIR
101: KTETDHEIQI RSTLEKIAKM EGMVKNRENI RREVQSAHIE AHRLAREREE LASKVKLGMK DLKKVCLEAE SLEASSQELE RLKEEHQRLR KEFEEEKSGN
201: VEKLAQLKGM ERKIIGAVKA IEKLRSEIST ARNKAVEN
101: KTETDHEIQI RSTLEKIAKM EGMVKNRENI RREVQSAHIE AHRLAREREE LASKVKLGMK DLKKVCLEAE SLEASSQELE RLKEEHQRLR KEFEEEKSGN
201: VEKLAQLKGM ERKIIGAVKA IEKLRSEIST ARNKAVEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.