Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98491 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 79.46 | 80.92 |
| CDX97599 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 79.15 | 80.86 |
| Bra027313.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 79.15 | 79.39 |
| Bra027315.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 79.15 | 78.92 |
| Solyc07g062110.2.1 | Tomato | nucleus | 56.19 | 58.31 |
| KRH13877 | Soybean | nucleus | 53.17 | 54.32 |
| VIT_19s0014g00260.t01 | Wine grape | cytosol, mitochondrion, nucleus | 50.76 | 54.19 |
| KRH43428 | Soybean | endoplasmic reticulum | 53.17 | 53.5 |
| GSMUA_Achr9P19990_001 | Banana | cytosol | 29.91 | 52.94 |
| KXG36288 | Sorghum | mitochondrion | 43.5 | 40.68 |
| Zm00001d021587_P002 | Maize | mitochondrion | 41.69 | 39.09 |
| TraesCS2A01G226300.1 | Wheat | nucleus | 40.48 | 38.73 |
| TraesCS2D01G231800.1 | Wheat | mitochondrion | 40.48 | 38.73 |
| Os07t0508200-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 40.79 | 37.92 |
| HORVU2Hr1G047850.4 | Barley | mitochondrion | 40.48 | 36.02 |
| TraesCS2B01G249600.3 | Wheat | plastid | 40.18 | 35.85 |
| AT1G55170.1 | Thale cress | nucleus | 28.1 | 32.86 |
| AT2G30120.5 | Thale cress | plastid | 25.38 | 28.57 |
| AT5G61920.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 19.94 | 27.73 |
| AT1G67170.1 | Thale cress | nucleus | 28.7 | 26.46 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820703 | UniProt:A0A178VMZ8 | ProteinID:AEE75563.1 | ArrayExpress:AT3G14750 | EnsemblPlantsGene:AT3G14750 |
| RefSeq:AT3G14750 | TAIR:AT3G14750 | RefSeq:AT3G14750-TAIR-G | EnsemblPlants:AT3G14750.1 | TAIR:AT3G14750.1 | EMBL:AY035083 |
| EMBL:AY051034 | Unigene:At.20367 | ProteinID:BAB02406.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | RefSeq:NP_566492.1 |
| ProteinID:OAP06831.1 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0025022 | PANTHER:PTHR33405 | PANTHER:PTHR33405:SF7 | UniProt:Q93V84 |
| UniParc:UPI00000A2D21 | SEG:seg | : | : | : | : |
Description
FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
Coordinates
chr3:-:4953547..4955754
Molecular Weight (calculated)
36747.4 Da
IEP (calculated)
5.846
GRAVY (calculated)
-0.798
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.