Factsheet for Zm00001d021587_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36288	Sorghum	mitochondrion	91.5	91.24
TraesCS2A01G226300.1	Wheat	nucleus	76.77	78.32
TraesCS2D01G231800.1	Wheat	mitochondrion	75.64	77.17
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	74.79	74.16
TraesCS2B01G249600.3	Wheat	plastid	76.2	72.51
HORVU2Hr1G047850.4	Barley	mitochondrion	75.35	71.51
GSMUA_Achr9P19990_001	Banana	cytosol	34.56	65.24
VIT_10s0003g02200.t01	Wine grape	cytosol, mitochondrion, nucleus	47.59	54.72
VIT_19s0014g00260.t01	Wine grape	cytosol, mitochondrion, nucleus	42.49	48.39
Solyc07g062110.2.1	Tomato	nucleus	43.63	48.28
KRH13877	Soybean	nucleus	43.06	46.91
KRH43428	Soybean	endoplasmic reticulum	43.06	46.2
CDX98491	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.81	42.15
CDX97599	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.53	41.98
AT3G14750.1	Thale cress	nucleus, plastid	39.09	41.69
Bra027313.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	38.53	41.21
Bra027315.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	38.53	40.96
Zm00001d012984_P002	Maize	mitochondrion	31.73	34.67
Zm00001d034618_P003	Maize	extracellular, mitochondrion	30.88	34.28
Zm00001d052473_P001	Maize	nucleus	25.78	33.46
Zm00001d004959_P003	Maize	cytosol	24.36	29.86
Zm00001d044699_P002	Maize	nucleus	23.51	23.71
Zm00001d025689_P002	Maize	cytosol	24.08	17.75
Zm00001d003291_P002	Maize	mitochondrion, plastid	23.8	16.37

Protein Annotations

EMBL:BT068166	EnsemblPlants:Zm00001d021587_P002	EnsemblPlants:Zm00001d021587_T002	EnsemblPlantsGene:Zm00001d021587	ncoils:Coil	PANTHER:PTHR33405
PANTHER:PTHR33405:SF7	ProteinID:ONM57595.1	SEG:seg	UniParc:UPI000195CF06	UniProt:C0PIP7	MapMan:35.1

Description

Protein FLX-like 1

Coordinates

chr7:+:157216178..157224292

Molecular Weight (calculated)

38650.1 Da

IEP (calculated)

6.833

GRAVY (calculated)

-0.779

Length

353 amino acids

Sequence
(BLAST)

001: MAGRHRNPLP PSYPRAAAAA AGNHLPPPLH PHLPPHHPLD DYRDPPRLPP HHHIDDFRDP SRLPPGHPDS FQEPPPPHLR HFVGHGHGGA GGPLPPQPHV
101: VAALEERLGA EIDEAHALLA QNQRLAATHV ALVQEVAAAR HELGRTANAL TSAQEESDLR LREVYERSLK MEAELRAVHE MRADLAQVRM DIQNLGAERQ
201: ELMGQVQGLT QDLARSAEDL QKVSALKSEI QEIKHETQHL RSCIELEKKG YAESYEQGQE MQKNLISVAS EVEKLRAEVA NAEKRSRAIV SAGNQGYNGS
301: YGNPKANYAA NPYNSGYGMN QATAATDSGS QYGTGATHGS WGAYDLQRAS GRR

Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)

001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R

Arabidopsis Description

FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.