Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G231800.1 | Wheat | mitochondrion | 98.84 | 98.84 |
| TraesCS2B01G249600.3 | Wheat | plastid | 99.13 | 92.45 |
| HORVU2Hr1G047850.4 | Barley | mitochondrion | 97.98 | 91.13 |
| Zm00001d021587_P002 | Maize | mitochondrion | 78.32 | 76.77 |
| Os07t0508200-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 78.61 | 76.4 |
| KXG36288 | Sorghum | mitochondrion | 78.03 | 76.27 |
| GSMUA_Achr9P19990_001 | Banana | cytosol | 33.81 | 62.57 |
| VIT_10s0003g02200.t01 | Wine grape | cytosol, mitochondrion, nucleus | 46.24 | 52.12 |
| Solyc07g062110.2.1 | Tomato | nucleus | 43.64 | 47.34 |
| VIT_19s0014g00260.t01 | Wine grape | cytosol, mitochondrion, nucleus | 41.62 | 46.45 |
| KRH13877 | Soybean | nucleus | 42.49 | 45.37 |
| KRH43428 | Soybean | endoplasmic reticulum | 42.77 | 44.98 |
| CDX98491 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 38.73 | 41.23 |
| CDX97599 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 38.44 | 41.05 |
| AT3G14750.1 | Thale cress | nucleus, plastid | 38.73 | 40.48 |
| Bra027313.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 38.44 | 40.3 |
| Bra027315.1-P | Field mustard | cytosol, mitochondrion, nucleus, peroxisome | 38.44 | 40.06 |
| TraesCS5A01G473300.1 | Wheat | cytosol, mitochondrion, nucleus | 30.64 | 31.27 |
| TraesCS3A01G526000.1 | Wheat | nucleus | 23.41 | 30.34 |
| TraesCS3A01G524600.1 | Wheat | nucleus | 23.12 | 29.96 |
| TraesCS1A01G232900.1 | Wheat | nucleus | 13.58 | 29.01 |
| TraesCS5A01G121400.1 | Wheat | nucleus | 24.28 | 25.85 |
| TraesCS6A01G169900.1 | Wheat | nucleus | 25.72 | 19.06 |
| TraesCS6A01G347500.1 | Wheat | mitochondrion | 23.7 | 18.1 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G226300.1 | EnsemblPlantsGene:TraesCS2A01G226300 | ncoils:Coil | PANTHER:PTHR33405 | PANTHER:PTHR33405:SF7 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:233470543..233476085
Molecular Weight (calculated)
37916.3 Da
IEP (calculated)
7.057
GRAVY (calculated)
-0.793
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRHRNPLP SSFSRGAGAG NHPHPPPPHH PHLPPYHLDE FREPPRLPPH HLDDFRDPAR LPPGHPDSLR EHPPPPRHHF AGHGGGALPP ASHMAAALEE
101: RIGAEIEEAH ALLGQNQRLS ATHVALVQEV SAVRHELGHT ARAIGAAQQE GDLRIREVYE RLMKMEAELR AVEEMRAELA HVRMDIQQLG AARQELMGQI
201: QGYTQDLARS AVELQQVAAV KAETQELRHE TQHLRSSIEL EKKGYAESYE QGQEMQKKLV SVASEVEKLR AEVANAEKRS RAAVSAGNQG YAGSYGNPNA
301: NYAANPYNAG YSMNQANATD SGSQYGAGAA HSSWGAYDMQ RAPGRR
101: RIGAEIEEAH ALLGQNQRLS ATHVALVQEV SAVRHELGHT ARAIGAAQQE GDLRIREVYE RLMKMEAELR AVEEMRAELA HVRMDIQQLG AARQELMGQI
201: QGYTQDLARS AVELQQVAAV KAETQELRHE TQHLRSSIEL EKKGYAESYE QGQEMQKKLV SVASEVEKLR AEVANAEKRS RAAVSAGNQG YAGSYGNPNA
301: NYAANPYNAG YSMNQANATD SGSQYGAGAA HSSWGAYDMQ RAPGRR
001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R
Arabidopsis Description
FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.