Factsheet for Bra027313.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027315.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	100.0	99.4
CDX97599	Canola	cytosol, mitochondrion, nucleus, peroxisome	97.58	99.38
AT3G14750.1	Thale cress	nucleus, plastid	79.39	79.15
Solyc07g062110.2.1	Tomato	nucleus	54.24	56.11
KRH13877	Soybean	nucleus	53.03	54.01
KRH43428	Soybean	endoplasmic reticulum	52.73	52.89
GSMUA_Achr9P19990_001	Banana	cytosol	29.7	52.41
VIT_19s0014g00260.t01	Wine grape	cytosol, mitochondrion, nucleus	49.09	52.26
KXG36288	Sorghum	mitochondrion	41.82	38.98
Zm00001d021587_P002	Maize	mitochondrion	41.21	38.53
TraesCS2D01G231800.1	Wheat	mitochondrion	40.3	38.44
TraesCS2A01G226300.1	Wheat	nucleus	40.3	38.44
TraesCS2B01G249600.3	Wheat	plastid	40.0	35.58
HORVU2Hr1G047850.4	Barley	mitochondrion	40.0	35.48
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	37.88	35.11
Bra037981.1-P	Field mustard	nucleus	27.27	33.09
Bra010043.1-P	Field mustard	nucleus, peroxisome, plasma membrane, plastid	17.88	28.23
Bra018336.1-P	Field mustard	nucleus	22.73	26.98
Bra034018.1-P	Field mustard	nucleus	24.55	26.47
Bra004207.1-P	Field mustard	nucleus	27.58	26.45
Bra014359.1-P	Field mustard	nucleus	24.24	24.39

Protein Annotations

EnsemblPlants:Bra027313.1	EnsemblPlants:Bra027313.1-P	EnsemblPlantsGene:Bra027313	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF7
SEG:seg	UniParc:UPI0002547C03	UniProt:M4EEV1	MapMan:35.1	:	:

Description

AT3G14750 (E=4e-106) | unknown protein

Coordinates

chrA05:+:20274444..20276045

Molecular Weight (calculated)

36996.3 Da

IEP (calculated)

6.595

GRAVY (calculated)

-0.920

Length

330 amino acids

Sequence
(BLAST)

001: MSGRNRGSYG GLQPPINQPP FVRGLGGHAP PPHPHPHPHP SRPLDDNREL PQFRNHHPQH HHHSIIEDRI ASQNQDVQGL LADNQRLAAT HVALKQELEV
101: AQHELQRMMH YIDSLRAEED IMMREMYDKS MRCEVELHQV EALRADVQKV RADIKEFTAS RQELTSQVHL MTQDLGRLTA ELQQIPTLTA EIENTKQELQ
201: RARAAIDYEK KGYAENYEHG KVMEQKLVAM ARELEKLRAE IANSESRAHA TGPVGNTGGV GYGGGYGNHD PAGYAVNPYQ PNYAMNPAQA QGGVEGYYPP
301: PYGAAPTAWA GGYDPHQQQQ QYYPQQGQGQ

Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)

001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R

Arabidopsis Description

FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.