CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021587_P002	Maize	mitochondrion	91.24	91.5
TraesCS2A01G226300.1	Wheat	nucleus	76.27	78.03
TraesCS2D01G231800.1	Wheat	mitochondrion	75.14	76.88
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	75.42	75.0
TraesCS2B01G249600.3	Wheat	plastid	75.71	72.24
HORVU2Hr1G047850.4	Barley	mitochondrion	75.42	71.77
GSMUA_Achr9P19990_001	Banana	cytosol	33.9	64.17
VIT_10s0003g02200.t01	Wine grape	cytosol, mitochondrion, nucleus	48.31	55.7
Solyc07g062110.2.1	Tomato	nucleus	44.63	49.53
VIT_19s0014g00260.t01	Wine grape	cytosol, mitochondrion, nucleus	42.37	48.39
KRH13877	Soybean	nucleus	42.94	46.91
KRH43428	Soybean	endoplasmic reticulum	42.94	46.2
AT3G14750.1	Thale cress	nucleus, plastid	40.68	43.5
CDX97599	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.98	42.59
CDX98491	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.98	42.46
Bra027313.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	38.98	41.82
Bra027315.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	38.98	41.57
EER93206	Sorghum	mitochondrion	33.9	37.15
EES09236	Sorghum	nucleus	25.14	32.96
OQU78707	Sorghum	nucleus	24.86	25.21
KXG23194	Sorghum	nucleus	24.29	24.57
OQU81803	Sorghum	nucleus, plastid	24.01	19.19
EES06432	Sorghum	mitochondrion	25.71	18.24

Protein Annotations

EnsemblPlants:KXG36288	EnsemblPlantsGene:SORBI_3002G313500	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF7	ProteinID:KXG36288
ProteinID:KXG36288.1	SEG:seg	UniParc:UPI00081AD4A2	UniProt:A0A1B6QEF9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:+:68690735..68694855

Molecular Weight (calculated)

38619.2 Da

IEP (calculated)

6.936

GRAVY (calculated)

-0.739

Length

354 amino acids

Sequence
(BLAST)

001: MAGRHRNPLP PSYPRGGGGN HPPPPLHHPL HPHLPPHHPL DDFRDPPRLP PHHHLDDFRD PSRLPPGHPD SFQEPPPPHL RHFVGHGHGG AGGPLPPQPH
101: VVAALEERLG AEIDEAHALL AQNQRLAATH VALVQEVAAA RHELGRTAHA LTSAQEENDL RLREVYERSM KLEAELRAVH EMRAELAQVR MDIQNLGAAR
201: QELMGQVQGL TQDLARSAED LQKVSALKAE IQEIKHETQH LRSGIELEKK GYAASYEQGQ EMQKNLISVA SEVEKLRAEV ANAEKRSLAV VSAGNQGYIG
301: SYGNPKANYA ANPFNSGYGI NQANAATEAG SQYGTSAAHG SWGGYDLQRA SGHR

Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)

001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R

Arabidopsis Description

FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.