Factsheet for TraesCS2D01G231800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G226300.1	Wheat	nucleus	98.84	98.84
TraesCS2B01G249600.3	Wheat	plastid	97.98	91.37
HORVU2Hr1G047850.4	Barley	mitochondrion	96.82	90.05
Os07t0508200-01	Rice	cytosol, mitochondrion, nucleus, plastid	78.03	75.84
Zm00001d021587_P002	Maize	mitochondrion	77.17	75.64
KXG36288	Sorghum	mitochondrion	76.88	75.14
GSMUA_Achr9P19990_001	Banana	cytosol	33.53	62.03
VIT_10s0003g02200.t01	Wine grape	cytosol, mitochondrion, nucleus	45.66	51.47
Solyc07g062110.2.1	Tomato	nucleus	43.35	47.02
VIT_19s0014g00260.t01	Wine grape	cytosol, mitochondrion, nucleus	41.33	46.13
KRH13877	Soybean	nucleus	41.91	44.75
KRH43428	Soybean	endoplasmic reticulum	42.2	44.38
CDX98491	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.73	41.23
CDX97599	Canola	cytosol, mitochondrion, nucleus, peroxisome	38.44	41.05
AT3G14750.1	Thale cress	nucleus, plastid	38.73	40.48
Bra027313.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	38.44	40.3
Bra027315.1-P	Field mustard	cytosol, mitochondrion, nucleus, peroxisome	38.44	40.06
TraesCS5D01G486000.1	Wheat	mitochondrion	30.06	30.86
TraesCS3D01G529800.1	Wheat	cytosol	23.41	30.34
TraesCS3D01G531200.1	Wheat	nucleus	23.12	29.96
TraesCS1D01G234100.2	Wheat	nucleus	22.54	29.55
TraesCS5D01G118100.2	Wheat	nucleus	23.99	25.54
TraesCS6D01G159700.1	Wheat	nucleus	26.3	19.49
TraesCS6D01G330600.1	Wheat	mitochondrion	23.7	18.51

Protein Annotations

EnsemblPlants:TraesCS2D01G231800.1	EnsemblPlantsGene:TraesCS2D01G231800	ncoils:Coil	PANTHER:PTHR33405	PANTHER:PTHR33405:SF7	SEG:seg
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:204140196..204146380

Molecular Weight (calculated)

37893.3 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.755

Length

346 amino acids

Sequence
(BLAST)

001: MAGRHRNPLP SSFSRGAGAG NHPHPPPPHH PHLPPYHLDE FREPPRLPPH HLDDFRDPAR LPPGHPDSLR EHPPLPRHHF AGHGGGALPP ASHMAAALEE
101: RIGAEIEEAH ALLGQNQRLS ATHVALVQEV SAVLHELGHT ARAIGAAQQE GDLRIREVYE RLMKMEAEFR AVEEMRAELA HVRMDIQQLG AARQELMGQI
201: QGYTQDLARS AVELQQVAAV KAETQELRHE TQHLRSSIEL EKKGYAESYE QGQEMQKKLV SVASEVEKLR AEVANAEKRS RAAVSAGNQG YAGGYGNPNA
301: NYAANPYNAG YSMNQANATD SGSQYGAGAA HSSWGAYDMQ RAPGRR

Best Arabidopsis Sequence Match ( AT3G14750.1 )
(BLAST)

001: MSGRNRGPPP PSMKGGSYSG LQAPVHQPPF VRGLGGGPVP PPPHPSMIDD SREPQFRVDA RGLPPQFSIL EDRLAAQNQD VQGLLADNQR LAATHVALKQ
101: ELEVAQHELQ RIMHYIDSLR AEEEIMMREM YDKSMRSEME LREVDAMRAE IQKIRADIKE FTSGRQELTS QVHLMTQDLA RLTADLQQIP TLTAEIENTK
201: QELQRARAAI DYEKKGYAEN YEHGKIMEHK LVAMARELEK LRAEIANSET SAYANGPVGN PGGVAYGGGY GNPEAGYPVN PYQPNYTMNP AQTGVVGYYP
301: PPYGPQAAWA GGYDPQQQQQ QQPPPQGQGH R

Arabidopsis Description

FLXL1Protein FLX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V84]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.