Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G121400.1 | Wheat | nucleus | 97.85 | 97.85 |
| TraesCS5B01G113500.2 | Wheat | nucleus | 97.23 | 97.23 |
| Os12t0193100-03 | Rice | nucleus | 70.77 | 73.48 |
| OQU78707 | Sorghum | nucleus | 64.62 | 60.17 |
| KXG23194 | Sorghum | nucleus | 62.77 | 58.29 |
| Zm00001d044699_P002 | Maize | nucleus | 60.0 | 55.71 |
| GSMUA_Achr8P21750_001 | Banana | nucleus | 42.77 | 49.64 |
| KRH10004 | Soybean | mitochondrion | 39.08 | 43.94 |
| GSMUA_Achr10P... | Banana | cytosol | 40.31 | 42.81 |
| CDY24052 | Canola | nucleus | 34.77 | 41.54 |
| Bra037981.1-P | Field mustard | nucleus | 34.46 | 41.18 |
| CDY33066 | Canola | nucleus | 34.46 | 41.18 |
| AT1G55170.1 | Thale cress | nucleus | 34.77 | 39.93 |
| PGSC0003DMT400006407 | Potato | mitochondrion, nucleus | 33.85 | 39.57 |
| Solyc03g121500.2.1 | Tomato | cytosol, nucleus | 30.15 | 39.2 |
| KRH23325 | Soybean | nucleus | 39.08 | 38.6 |
| VIT_09s0002g02070.t01 | Wine grape | mitochondrion | 40.0 | 35.71 |
| TraesCS3D01G529800.1 | Wheat | cytosol | 26.77 | 32.58 |
| TraesCS3D01G531200.1 | Wheat | nucleus | 26.15 | 31.84 |
| TraesCS1D01G234100.2 | Wheat | nucleus | 24.31 | 29.92 |
| Bra014359.1-P | Field mustard | nucleus | 27.69 | 27.44 |
| CDY08227 | Canola | nucleus | 27.08 | 26.83 |
| TraesCS2D01G231800.1 | Wheat | mitochondrion | 25.54 | 23.99 |
| TraesCS5D01G486000.1 | Wheat | mitochondrion | 21.23 | 20.47 |
| TraesCS6D01G159700.1 | Wheat | nucleus | 21.85 | 15.2 |
| TraesCS6D01G330600.1 | Wheat | mitochondrion | 19.08 | 14.0 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G118100.2 | EnsemblPlantsGene:TraesCS5D01G118100 | ncoils:Coil | PANTHER:PTHR33405 | PANTHER:PTHR33405:SF14 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5D:+:155839275..155846567
Molecular Weight (calculated)
37604.9 Da
IEP (calculated)
7.308
GRAVY (calculated)
-0.877
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRDRLPRR FVEDGRGYVD ARVAEDRRGH HPGIRVVDDR RGHHEIHVVD DRRAYPAGRV IEDRRAYPEI HERPLMRVAP RSHPDVLEEE IQLHKVDFRR
101: LMADRHALAE ERMELHRELQ AGKEEVCHLN MIIAEINAKK EAYISELVDK RRKLEAELRS NEPLRDEVVH LRGEIEKLLA VRKELSAKAA SLMQELSRER
201: SDKQQLPMLK AEIEGLQLEL THARNACELE QKGNFELVEQ RKAMEKSMIS MAQEIQQMRA ELANFDGRPW GTGGAHGMKL GSPEATFPTQ YGDKYNIHAG
301: VSEKGPSHPP ESSWGTFEKN RFQYR
101: LMADRHALAE ERMELHRELQ AGKEEVCHLN MIIAEINAKK EAYISELVDK RRKLEAELRS NEPLRDEVVH LRGEIEKLLA VRKELSAKAA SLMQELSRER
201: SDKQQLPMLK AEIEGLQLEL THARNACELE QKGNFELVEQ RKAMEKSMIS MAQEIQQMRA ELANFDGRPW GTGGAHGMKL GSPEATFPTQ YGDKYNIHAG
301: VSEKGPSHPP ESSWGTFEKN RFQYR
001: MSGRNRIHRD IRDSYHDHRD LPPERPFLRG PPLLQPPPPS LLEDLQIQEG EIRRQDAEIR RLLSDNHGLA DDRMVLEREL VAAKEELHRM NLMISDLRAE
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
101: QDLQLREFSE KRHKLEGDVR AMESYKKEAS QLRGEVQKLD EIKRELSGNV QLLRKDLAKL QSDNKQIPGM RAEVKDLQKE LMHARDAIEY EKKEKFELME
201: QRQTMEKNMV SMAREVEKLR AELATVDSRP WGFGGSYGMN YNNMDGTFRG SYGENDTYLG SSERSQYYSH GSGSQKKPRL DRH
Arabidopsis Description
FLXL3Protein FLX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C717]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.